Gene : AG A. thaliana TAIR10
Primary Identifier:  ? AT4G18960 Defline:  (1 of 1) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS
Genomic Order:  1841 Name:  ? AT4G18960
Secondary Identifier:  ? PAC:19647337
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18960 0.5kb upstream 0.5kb upstream 6184 true Chr4: 10382356-10388539 Arabidopsis thaliana
AT4G18960 0.5kb upstream 0.5kb upstream 500 false Chr4: 10382356-10382855 Arabidopsis thaliana
AT4G18960 0.5kb downstream 0.5kb downstream 6184 true Chr4: 10382856-10389039 Arabidopsis thaliana
AT4G18960 0.5kb downstream 0.5kb downstream 500 false Chr4: 10388540-10389039 Arabidopsis thaliana
AT4G18960 1.0kb upstream 1.0kb upstream 6684 true Chr4: 10381856-10388539 Arabidopsis thaliana
AT4G18960 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10381856-10382855 Arabidopsis thaliana
AT4G18960 1.0kb downstream 1.0kb downstream 6684 true Chr4: 10382856-10389539 Arabidopsis thaliana
AT4G18960 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10388540-10389539 Arabidopsis thaliana
AT4G18960 2.0kb upstream 2.0kb upstream 7684 true Chr4: 10380856-10388539 Arabidopsis thaliana
AT4G18960 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10380856-10382855 Arabidopsis thaliana
AT4G18960 2.0kb downstream 2.0kb downstream 7684 true Chr4: 10382856-10390539 Arabidopsis thaliana
AT4G18960 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10388540-10390539 Arabidopsis thaliana
AT4G18960 5.0kb upstream 5.0kb upstream 10684 true Chr4: 10377856-10388539 Arabidopsis thaliana
AT4G18960 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10377856-10382855 Arabidopsis thaliana
AT4G18960 5.0kb downstream 5.0kb downstream 10684 true Chr4: 10382856-10393539 Arabidopsis thaliana
AT4G18960 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10388540-10393539 Arabidopsis thaliana
AT4G18960 10.0kb upstream 10.0kb upstream 15684 true Chr4: 10372856-10388539 Arabidopsis thaliana
AT4G18960 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10372856-10382855 Arabidopsis thaliana
AT4G18960 10.0kb downstream 10.0kb downstream 15684 true Chr4: 10382856-10398539 Arabidopsis thaliana
AT4G18960 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10388540-10398539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360522 5261 Brassicaceae View MSA
123834602 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.001     Low Low
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.003     Low  

0 Strain