Gene : RPL16B A. thaliana TAIR10
Primary Identifier:  ? AT4G18730 Defline:  (1 of 4) K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11)
Genomic Order:  1816 Name:  ? AT4G18730
Secondary Identifier:  ? PAC:19644627
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18730 0.5kb upstream 0.5kb upstream 1720 true Chr4: 10301663-10303382 Arabidopsis thaliana
AT4G18730 0.5kb upstream 0.5kb upstream 500 false Chr4: 10301663-10302162 Arabidopsis thaliana
AT4G18730 0.5kb downstream 0.5kb downstream 1720 true Chr4: 10302163-10303882 Arabidopsis thaliana
AT4G18730 0.5kb downstream 0.5kb downstream 500 false Chr4: 10303383-10303882 Arabidopsis thaliana
AT4G18730 1.0kb upstream 1.0kb upstream 2220 true Chr4: 10301163-10303382 Arabidopsis thaliana
AT4G18730 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10301163-10302162 Arabidopsis thaliana
AT4G18730 1.0kb downstream 1.0kb downstream 2220 true Chr4: 10302163-10304382 Arabidopsis thaliana
AT4G18730 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10303383-10304382 Arabidopsis thaliana
AT4G18730 2.0kb upstream 2.0kb upstream 3220 true Chr4: 10300163-10303382 Arabidopsis thaliana
AT4G18730 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10300163-10302162 Arabidopsis thaliana
AT4G18730 2.0kb downstream 2.0kb downstream 3220 true Chr4: 10302163-10305382 Arabidopsis thaliana
AT4G18730 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10303383-10305382 Arabidopsis thaliana
AT4G18730 5.0kb upstream 5.0kb upstream 6220 true Chr4: 10297163-10303382 Arabidopsis thaliana
AT4G18730 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10297163-10302162 Arabidopsis thaliana
AT4G18730 5.0kb downstream 5.0kb downstream 6220 true Chr4: 10302163-10308382 Arabidopsis thaliana
AT4G18730 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10303383-10308382 Arabidopsis thaliana
AT4G18730 10.0kb upstream 10.0kb upstream 11220 true Chr4: 10292163-10303382 Arabidopsis thaliana
AT4G18730 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10292163-10302162 Arabidopsis thaliana
AT4G18730 10.0kb downstream 10.0kb downstream 11220 true Chr4: 10302163-10313382 Arabidopsis thaliana
AT4G18730 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10303383-10313382 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378859 5261 Brassicaceae View MSA
123837006 5264 Brassicales-Malvales View MSA
124344079 5266 SBM View MSA
124253594 5268 Malvidae View MSA
124072174 5270 Rosid View MSA
123743053 5271 Pentapetalae View MSA
122795904 5272 Eudicot View MSA
122042572 5273 Angiosperm View MSA
121345121 5274 Embryophyte View MSA
123424367 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 135.812     High  
cufflinks 182.096     High  
cufflinks 117.449     High  
cufflinks 173.584     High  
cufflinks 89.767     High Low
cufflinks 190.764     High  

0 Strain