Gene : DOT4 A. thaliana TAIR10
Primary Identifier:  ? AT4G18750 Defline:  (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
Genomic Order:  1818 Name:  ? AT4G18750
Secondary Identifier:  ? PAC:19646887
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18750 0.5kb upstream 0.5kb upstream 3221 true Chr4: 10304350-10307570 Arabidopsis thaliana
AT4G18750 0.5kb upstream 0.5kb upstream 500 false Chr4: 10304350-10304849 Arabidopsis thaliana
AT4G18750 0.5kb downstream 0.5kb downstream 3221 true Chr4: 10304850-10308070 Arabidopsis thaliana
AT4G18750 0.5kb downstream 0.5kb downstream 500 false Chr4: 10307571-10308070 Arabidopsis thaliana
AT4G18750 1.0kb upstream 1.0kb upstream 3721 true Chr4: 10303850-10307570 Arabidopsis thaliana
AT4G18750 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10303850-10304849 Arabidopsis thaliana
AT4G18750 1.0kb downstream 1.0kb downstream 3721 true Chr4: 10304850-10308570 Arabidopsis thaliana
AT4G18750 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10307571-10308570 Arabidopsis thaliana
AT4G18750 2.0kb upstream 2.0kb upstream 4721 true Chr4: 10302850-10307570 Arabidopsis thaliana
AT4G18750 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10302850-10304849 Arabidopsis thaliana
AT4G18750 2.0kb downstream 2.0kb downstream 4721 true Chr4: 10304850-10309570 Arabidopsis thaliana
AT4G18750 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10307571-10309570 Arabidopsis thaliana
AT4G18750 5.0kb upstream 5.0kb upstream 7721 true Chr4: 10299850-10307570 Arabidopsis thaliana
AT4G18750 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10299850-10304849 Arabidopsis thaliana
AT4G18750 5.0kb downstream 5.0kb downstream 7721 true Chr4: 10304850-10312570 Arabidopsis thaliana
AT4G18750 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10307571-10312570 Arabidopsis thaliana
AT4G18750 10.0kb upstream 10.0kb upstream 12721 true Chr4: 10294850-10307570 Arabidopsis thaliana
AT4G18750 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10294850-10304849 Arabidopsis thaliana
AT4G18750 10.0kb downstream 10.0kb downstream 12721 true Chr4: 10304850-10317570 Arabidopsis thaliana
AT4G18750 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10307571-10317570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367627 5261 Brassicaceae View MSA
123829331 5264 Brassicales-Malvales View MSA
124340788 5266 SBM View MSA
124242256 5268 Malvidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.368       High
cufflinks 0.758        
cufflinks 1.547        
cufflinks 0.738        
cufflinks 1.018        
cufflinks 0.713        

0 Strain