Gene : CHLI1 A. thaliana TAIR10
Primary Identifier:  ? AT4G18480 Defline:  (1 of 2) K03405 - magnesium chelatase subunit I (chlI, bchI)
Genomic Order:  1788 Name:  ? AT4G18480
Secondary Identifier:  ? PAC:19645186
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CHLOROPHYLL-SYN Arabidopsis thaliana pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18480 0.5kb upstream 0.5kb upstream 2298 true Chr4: 10201672-10203969 Arabidopsis thaliana
AT4G18480 0.5kb upstream 0.5kb upstream 500 false Chr4: 10203470-10203969 Arabidopsis thaliana
AT4G18480 0.5kb downstream 0.5kb downstream 2298 true Chr4: 10201172-10203469 Arabidopsis thaliana
AT4G18480 0.5kb downstream 0.5kb downstream 500 false Chr4: 10201172-10201671 Arabidopsis thaliana
AT4G18480 1.0kb upstream 1.0kb upstream 2798 true Chr4: 10201672-10204469 Arabidopsis thaliana
AT4G18480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10203470-10204469 Arabidopsis thaliana
AT4G18480 1.0kb downstream 1.0kb downstream 2798 true Chr4: 10200672-10203469 Arabidopsis thaliana
AT4G18480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10200672-10201671 Arabidopsis thaliana
AT4G18480 2.0kb upstream 2.0kb upstream 3798 true Chr4: 10201672-10205469 Arabidopsis thaliana
AT4G18480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10203470-10205469 Arabidopsis thaliana
AT4G18480 2.0kb downstream 2.0kb downstream 3798 true Chr4: 10199672-10203469 Arabidopsis thaliana
AT4G18480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10199672-10201671 Arabidopsis thaliana
AT4G18480 5.0kb upstream 5.0kb upstream 6798 true Chr4: 10201672-10208469 Arabidopsis thaliana
AT4G18480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10203470-10208469 Arabidopsis thaliana
AT4G18480 5.0kb downstream 5.0kb downstream 6798 true Chr4: 10196672-10203469 Arabidopsis thaliana
AT4G18480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10196672-10201671 Arabidopsis thaliana
AT4G18480 10.0kb upstream 10.0kb upstream 11798 true Chr4: 10201672-10213469 Arabidopsis thaliana
AT4G18480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10203470-10213469 Arabidopsis thaliana
AT4G18480 10.0kb downstream 10.0kb downstream 11798 true Chr4: 10191672-10203469 Arabidopsis thaliana
AT4G18480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10191672-10201671 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122364037 5261 Brassicaceae View MSA
123838175 5264 Brassicales-Malvales View MSA
124343435 5266 SBM View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 234.211     High  
cufflinks 5.034        
cufflinks 310.309     High High
cufflinks 5.413        
cufflinks 220.976     High  
cufflinks 4.212        

0 Strain