Gene : AT4G18570 A. thaliana TAIR10
Defline:  Tetratricopeptide repeat (TPR)-like superfamily protein Genomic Order:  1797
Name:  ? AT4G18570 Secondary Identifier:  ? PAC:19644405
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18570 0.5kb upstream 0.5kb upstream 3976 true Chr4: 10230718-10234693 Arabidopsis thaliana
AT4G18570 0.5kb upstream 0.5kb upstream 500 false Chr4: 10230718-10231217 Arabidopsis thaliana
AT4G18570 0.5kb downstream 0.5kb downstream 3976 true Chr4: 10231218-10235193 Arabidopsis thaliana
AT4G18570 0.5kb downstream 0.5kb downstream 500 false Chr4: 10234694-10235193 Arabidopsis thaliana
AT4G18570 1.0kb upstream 1.0kb upstream 4476 true Chr4: 10230218-10234693 Arabidopsis thaliana
AT4G18570 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10230218-10231217 Arabidopsis thaliana
AT4G18570 1.0kb downstream 1.0kb downstream 4476 true Chr4: 10231218-10235693 Arabidopsis thaliana
AT4G18570 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10234694-10235693 Arabidopsis thaliana
AT4G18570 2.0kb upstream 2.0kb upstream 5476 true Chr4: 10229218-10234693 Arabidopsis thaliana
AT4G18570 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10229218-10231217 Arabidopsis thaliana
AT4G18570 2.0kb downstream 2.0kb downstream 5476 true Chr4: 10231218-10236693 Arabidopsis thaliana
AT4G18570 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10234694-10236693 Arabidopsis thaliana
AT4G18570 5.0kb upstream 5.0kb upstream 8476 true Chr4: 10226218-10234693 Arabidopsis thaliana
AT4G18570 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10226218-10231217 Arabidopsis thaliana
AT4G18570 5.0kb downstream 5.0kb downstream 8476 true Chr4: 10231218-10239693 Arabidopsis thaliana
AT4G18570 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10234694-10239693 Arabidopsis thaliana
AT4G18570 10.0kb upstream 10.0kb upstream 13476 true Chr4: 10221218-10234693 Arabidopsis thaliana
AT4G18570 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10221218-10231217 Arabidopsis thaliana
AT4G18570 10.0kb downstream 10.0kb downstream 13476 true Chr4: 10231218-10244693 Arabidopsis thaliana
AT4G18570 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10234694-10244693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040940 5273 Angiosperm View MSA
122375625 5261 Brassicaceae View MSA
123838179 5264 Brassicales-Malvales View MSA
124337402 5266 SBM View MSA
124249818 5268 Malvidae View MSA
124067183 5270 Rosid View MSA
123746963 5271 Pentapetalae View MSA
122786098 5272 Eudicot View MSA
121309774 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.35        
cufflinks 16.032        
cufflinks 11.237        
cufflinks 12.115        
cufflinks 8.62       Low
cufflinks 23.988       High

0 Strain