Gene : AT4G18540 A. thaliana TAIR10
Genomic Order:  1795 Name:  ? AT4G18540
Secondary Identifier:  ? PAC:19647018
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G18540 0.5kb upstream 0.5kb upstream 2326 true Chr4: 10221203-10223528 Arabidopsis thaliana
AT4G18540 0.5kb upstream 0.5kb upstream 500 false Chr4: 10223029-10223528 Arabidopsis thaliana
AT4G18540 0.5kb downstream 0.5kb downstream 2326 true Chr4: 10220703-10223028 Arabidopsis thaliana
AT4G18540 0.5kb downstream 0.5kb downstream 500 false Chr4: 10220703-10221202 Arabidopsis thaliana
AT4G18540 1.0kb upstream 1.0kb upstream 2826 true Chr4: 10221203-10224028 Arabidopsis thaliana
AT4G18540 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10223029-10224028 Arabidopsis thaliana
AT4G18540 1.0kb downstream 1.0kb downstream 2826 true Chr4: 10220203-10223028 Arabidopsis thaliana
AT4G18540 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10220203-10221202 Arabidopsis thaliana
AT4G18540 2.0kb upstream 2.0kb upstream 3826 true Chr4: 10221203-10225028 Arabidopsis thaliana
AT4G18540 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10223029-10225028 Arabidopsis thaliana
AT4G18540 2.0kb downstream 2.0kb downstream 3826 true Chr4: 10219203-10223028 Arabidopsis thaliana
AT4G18540 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10219203-10221202 Arabidopsis thaliana
AT4G18540 5.0kb upstream 5.0kb upstream 6826 true Chr4: 10221203-10228028 Arabidopsis thaliana
AT4G18540 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10223029-10228028 Arabidopsis thaliana
AT4G18540 5.0kb downstream 5.0kb downstream 6826 true Chr4: 10216203-10223028 Arabidopsis thaliana
AT4G18540 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10216203-10221202 Arabidopsis thaliana
AT4G18540 10.0kb upstream 10.0kb upstream 11826 true Chr4: 10221203-10233028 Arabidopsis thaliana
AT4G18540 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10223029-10233028 Arabidopsis thaliana
AT4G18540 10.0kb downstream 10.0kb downstream 11826 true Chr4: 10211203-10223028 Arabidopsis thaliana
AT4G18540 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10211203-10221202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366750 5261 Brassicaceae View MSA
123840063 5264 Brassicales-Malvales View MSA
124322673 5266 SBM View MSA
124238238 5268 Malvidae View MSA
124060572 5270 Rosid View MSA
123736432 5271 Pentapetalae View MSA
122792384 5272 Eudicot View MSA
122047515 5273 Angiosperm View MSA
121347976 5274 Embryophyte View MSA
123380697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.396       High
cufflinks 0.008     Low  
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain