Gene : PRORP3 A. thaliana TAIR10
Primary Identifier:  ? AT4G21900 Defline:  (1 of 3) K18213 - proteinaceous RNase P (PRORP)
Genomic Order:  2149 Name:  ? AT4G21900
Secondary Identifier:  ? PAC:19644772
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21900 0.5kb upstream 0.5kb upstream 3505 true Chr4: 11616346-11619850 Arabidopsis thaliana
AT4G21900 0.5kb upstream 0.5kb upstream 500 false Chr4: 11619351-11619850 Arabidopsis thaliana
AT4G21900 0.5kb downstream 0.5kb downstream 3505 true Chr4: 11615846-11619350 Arabidopsis thaliana
AT4G21900 0.5kb downstream 0.5kb downstream 500 false Chr4: 11615846-11616345 Arabidopsis thaliana
AT4G21900 1.0kb upstream 1.0kb upstream 4005 true Chr4: 11616346-11620350 Arabidopsis thaliana
AT4G21900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11619351-11620350 Arabidopsis thaliana
AT4G21900 1.0kb downstream 1.0kb downstream 4005 true Chr4: 11615346-11619350 Arabidopsis thaliana
AT4G21900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11615346-11616345 Arabidopsis thaliana
AT4G21900 2.0kb upstream 2.0kb upstream 5005 true Chr4: 11616346-11621350 Arabidopsis thaliana
AT4G21900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11619351-11621350 Arabidopsis thaliana
AT4G21900 2.0kb downstream 2.0kb downstream 5005 true Chr4: 11614346-11619350 Arabidopsis thaliana
AT4G21900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11614346-11616345 Arabidopsis thaliana
AT4G21900 5.0kb upstream 5.0kb upstream 8005 true Chr4: 11616346-11624350 Arabidopsis thaliana
AT4G21900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11619351-11624350 Arabidopsis thaliana
AT4G21900 5.0kb downstream 5.0kb downstream 8005 true Chr4: 11611346-11619350 Arabidopsis thaliana
AT4G21900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11611346-11616345 Arabidopsis thaliana
AT4G21900 10.0kb upstream 10.0kb upstream 13005 true Chr4: 11616346-11629350 Arabidopsis thaliana
AT4G21900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11619351-11629350 Arabidopsis thaliana
AT4G21900 10.0kb downstream 10.0kb downstream 13005 true Chr4: 11606346-11619350 Arabidopsis thaliana
AT4G21900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11606346-11616345 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026579 5273 Angiosperm View MSA
122362154 5261 Brassicaceae View MSA
123837725 5264 Brassicales-Malvales View MSA
124338666 5266 SBM View MSA
124237965 5268 Malvidae View MSA
124061710 5270 Rosid View MSA
123740525 5271 Pentapetalae View MSA
122786072 5272 Eudicot View MSA
121296400 5274 Embryophyte View MSA
123426144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.148        
cufflinks 6.775       High
cufflinks 3.442        
cufflinks 6.157        
cufflinks 2.741       Low
cufflinks 6.421        

0 Strain