Gene : TOM1 A. thaliana TAIR10
Primary Identifier:  ? AT4G21790 Defline:  (1 of 4) PF06454 - Protein of unknown function (DUF1084) (DUF1084)
Genomic Order:  2136 Name:  ? AT4G21790
Secondary Identifier:  ? PAC:19644248
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0 Pathways

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21790 0.5kb upstream 0.5kb upstream 3285 true Chr4: 11569265-11572549 Arabidopsis thaliana
AT4G21790 0.5kb upstream 0.5kb upstream 500 false Chr4: 11569265-11569764 Arabidopsis thaliana
AT4G21790 0.5kb downstream 0.5kb downstream 3285 true Chr4: 11569765-11573049 Arabidopsis thaliana
AT4G21790 0.5kb downstream 0.5kb downstream 500 false Chr4: 11572550-11573049 Arabidopsis thaliana
AT4G21790 1.0kb upstream 1.0kb upstream 3785 true Chr4: 11568765-11572549 Arabidopsis thaliana
AT4G21790 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11568765-11569764 Arabidopsis thaliana
AT4G21790 1.0kb downstream 1.0kb downstream 3785 true Chr4: 11569765-11573549 Arabidopsis thaliana
AT4G21790 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11572550-11573549 Arabidopsis thaliana
AT4G21790 2.0kb upstream 2.0kb upstream 4785 true Chr4: 11567765-11572549 Arabidopsis thaliana
AT4G21790 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11567765-11569764 Arabidopsis thaliana
AT4G21790 2.0kb downstream 2.0kb downstream 4785 true Chr4: 11569765-11574549 Arabidopsis thaliana
AT4G21790 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11572550-11574549 Arabidopsis thaliana
AT4G21790 5.0kb upstream 5.0kb upstream 7785 true Chr4: 11564765-11572549 Arabidopsis thaliana
AT4G21790 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11564765-11569764 Arabidopsis thaliana
AT4G21790 5.0kb downstream 5.0kb downstream 7785 true Chr4: 11569765-11577549 Arabidopsis thaliana
AT4G21790 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11572550-11577549 Arabidopsis thaliana
AT4G21790 10.0kb upstream 10.0kb upstream 12785 true Chr4: 11559765-11572549 Arabidopsis thaliana
AT4G21790 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11559765-11569764 Arabidopsis thaliana
AT4G21790 10.0kb downstream 10.0kb downstream 12785 true Chr4: 11569765-11582549 Arabidopsis thaliana
AT4G21790 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11572550-11582549 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363451 5261 Brassicaceae View MSA
123834565 5264 Brassicales-Malvales View MSA
124343488 5266 SBM View MSA
124248985 5268 Malvidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.91        
cufflinks 42.598     High  
cufflinks 22.189        
cufflinks 38.661     High  
cufflinks 21.115       Low
cufflinks 44.48     High High

0 Strain