Gene : NRT1.8 A. thaliana TAIR10
Primary Identifier:  ? AT4G21680 Defline:  (1 of 1) PTHR11654//PTHR11654:SF90 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 7.2
Genomic Order:  2124 Name:  ? AT4G21680
Secondary Identifier:  ? PAC:19646301
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21680 0.5kb upstream 0.5kb upstream 2913 true Chr4: 11517353-11520265 Arabidopsis thaliana
AT4G21680 0.5kb upstream 0.5kb upstream 500 false Chr4: 11519766-11520265 Arabidopsis thaliana
AT4G21680 0.5kb downstream 0.5kb downstream 2913 true Chr4: 11516853-11519765 Arabidopsis thaliana
AT4G21680 0.5kb downstream 0.5kb downstream 500 false Chr4: 11516853-11517352 Arabidopsis thaliana
AT4G21680 1.0kb upstream 1.0kb upstream 3413 true Chr4: 11517353-11520765 Arabidopsis thaliana
AT4G21680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11519766-11520765 Arabidopsis thaliana
AT4G21680 1.0kb downstream 1.0kb downstream 3413 true Chr4: 11516353-11519765 Arabidopsis thaliana
AT4G21680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11516353-11517352 Arabidopsis thaliana
AT4G21680 2.0kb upstream 2.0kb upstream 4413 true Chr4: 11517353-11521765 Arabidopsis thaliana
AT4G21680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11519766-11521765 Arabidopsis thaliana
AT4G21680 2.0kb downstream 2.0kb downstream 4413 true Chr4: 11515353-11519765 Arabidopsis thaliana
AT4G21680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11515353-11517352 Arabidopsis thaliana
AT4G21680 5.0kb upstream 5.0kb upstream 7413 true Chr4: 11517353-11524765 Arabidopsis thaliana
AT4G21680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11519766-11524765 Arabidopsis thaliana
AT4G21680 5.0kb downstream 5.0kb downstream 7413 true Chr4: 11512353-11519765 Arabidopsis thaliana
AT4G21680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11512353-11517352 Arabidopsis thaliana
AT4G21680 10.0kb upstream 10.0kb upstream 12413 true Chr4: 11517353-11529765 Arabidopsis thaliana
AT4G21680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11519766-11529765 Arabidopsis thaliana
AT4G21680 10.0kb downstream 10.0kb downstream 12413 true Chr4: 11507353-11519765 Arabidopsis thaliana
AT4G21680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11507353-11517352 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360437 5261 Brassicaceae View MSA
123797955 5264 Brassicales-Malvales View MSA
124295651 5266 SBM View MSA
124148028 5268 Malvidae View MSA
123874114 5270 Rosid View MSA
123746803 5271 Pentapetalae View MSA
122794508 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.738        
cufflinks 22.609        
cufflinks 0.753        
cufflinks 16.353        
cufflinks 1.1        
cufflinks 21.616        

0 Strain