Gene : AT4G21534 A. thaliana TAIR10
Defline:  (1 of 2) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  2108
Name:  ? AT4G21534 Secondary Identifier:  ? PAC:19644478
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5129 Arabidopsis thaliana pathologic  
Athaliana PWY-6483 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21534 0.5kb upstream 0.5kb upstream 3091 true Chr4: 11455730-11458820 Arabidopsis thaliana
AT4G21534 0.5kb upstream 0.5kb upstream 500 false Chr4: 11455730-11456229 Arabidopsis thaliana
AT4G21534 0.5kb downstream 0.5kb downstream 3091 true Chr4: 11456230-11459320 Arabidopsis thaliana
AT4G21534 0.5kb downstream 0.5kb downstream 500 false Chr4: 11458821-11459320 Arabidopsis thaliana
AT4G21534 1.0kb upstream 1.0kb upstream 3591 true Chr4: 11455230-11458820 Arabidopsis thaliana
AT4G21534 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11455230-11456229 Arabidopsis thaliana
AT4G21534 1.0kb downstream 1.0kb downstream 3591 true Chr4: 11456230-11459820 Arabidopsis thaliana
AT4G21534 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11458821-11459820 Arabidopsis thaliana
AT4G21534 2.0kb upstream 2.0kb upstream 4591 true Chr4: 11454230-11458820 Arabidopsis thaliana
AT4G21534 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11454230-11456229 Arabidopsis thaliana
AT4G21534 2.0kb downstream 2.0kb downstream 4591 true Chr4: 11456230-11460820 Arabidopsis thaliana
AT4G21534 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11458821-11460820 Arabidopsis thaliana
AT4G21534 5.0kb upstream 5.0kb upstream 7591 true Chr4: 11451230-11458820 Arabidopsis thaliana
AT4G21534 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11451230-11456229 Arabidopsis thaliana
AT4G21534 5.0kb downstream 5.0kb downstream 7591 true Chr4: 11456230-11463820 Arabidopsis thaliana
AT4G21534 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11458821-11463820 Arabidopsis thaliana
AT4G21534 10.0kb upstream 10.0kb upstream 12591 true Chr4: 11446230-11458820 Arabidopsis thaliana
AT4G21534 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11446230-11456229 Arabidopsis thaliana
AT4G21534 10.0kb downstream 10.0kb downstream 12591 true Chr4: 11456230-11468820 Arabidopsis thaliana
AT4G21534 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11458821-11468820 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366251 5261 Brassicaceae View MSA
123799137 5264 Brassicales-Malvales View MSA
124296686 5266 SBM View MSA
124247883 5268 Malvidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.844        
cufflinks 11.714        
cufflinks 4.931       Low
cufflinks 12.846       High
cufflinks 5.914        
cufflinks 9.757        

0 Strain