Gene : PSBQA A. thaliana TAIR10
Primary Identifier:  ? AT4G21280 Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED
Genomic Order:  2082 Name:  ? AT4G21280
Secondary Identifier:  ? PAC:19646883
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-101 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21280 0.5kb upstream 0.5kb upstream 1872 true Chr4: 11333902-11335773 Arabidopsis thaliana
AT4G21280 0.5kb upstream 0.5kb upstream 500 false Chr4: 11333902-11334401 Arabidopsis thaliana
AT4G21280 0.5kb downstream 0.5kb downstream 1872 true Chr4: 11334402-11336273 Arabidopsis thaliana
AT4G21280 0.5kb downstream 0.5kb downstream 500 false Chr4: 11335774-11336273 Arabidopsis thaliana
AT4G21280 1.0kb upstream 1.0kb upstream 2372 true Chr4: 11333402-11335773 Arabidopsis thaliana
AT4G21280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11333402-11334401 Arabidopsis thaliana
AT4G21280 1.0kb downstream 1.0kb downstream 2372 true Chr4: 11334402-11336773 Arabidopsis thaliana
AT4G21280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11335774-11336773 Arabidopsis thaliana
AT4G21280 2.0kb upstream 2.0kb upstream 3372 true Chr4: 11332402-11335773 Arabidopsis thaliana
AT4G21280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11332402-11334401 Arabidopsis thaliana
AT4G21280 2.0kb downstream 2.0kb downstream 3372 true Chr4: 11334402-11337773 Arabidopsis thaliana
AT4G21280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11335774-11337773 Arabidopsis thaliana
AT4G21280 5.0kb upstream 5.0kb upstream 6372 true Chr4: 11329402-11335773 Arabidopsis thaliana
AT4G21280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11329402-11334401 Arabidopsis thaliana
AT4G21280 5.0kb downstream 5.0kb downstream 6372 true Chr4: 11334402-11340773 Arabidopsis thaliana
AT4G21280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11335774-11340773 Arabidopsis thaliana
AT4G21280 10.0kb upstream 10.0kb upstream 11372 true Chr4: 11324402-11335773 Arabidopsis thaliana
AT4G21280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11324402-11334401 Arabidopsis thaliana
AT4G21280 10.0kb downstream 10.0kb downstream 11372 true Chr4: 11334402-11345773 Arabidopsis thaliana
AT4G21280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11335774-11345773 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364990 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 340.011     High  
cufflinks 0.92        
cufflinks 317.602     High  
cufflinks 1.101        
cufflinks 257.931     High  
cufflinks 0.565       Low

0 Strain