Gene : AT4G21220 A. thaliana TAIR10
Defline:  (1 of 2) 2.3.1.191 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase / UDP-3-O-acyl-glucosamine N-acyltransferase Genomic Order:  2076
Name:  ? AT4G21220 Secondary Identifier:  ? PAC:19647117
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana NAGLIPASYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21220 0.5kb upstream 0.5kb upstream 2740 true Chr4: 11316828-11319567 Arabidopsis thaliana
AT4G21220 0.5kb upstream 0.5kb upstream 500 false Chr4: 11319068-11319567 Arabidopsis thaliana
AT4G21220 0.5kb downstream 0.5kb downstream 2740 true Chr4: 11316328-11319067 Arabidopsis thaliana
AT4G21220 0.5kb downstream 0.5kb downstream 500 false Chr4: 11316328-11316827 Arabidopsis thaliana
AT4G21220 1.0kb upstream 1.0kb upstream 3240 true Chr4: 11316828-11320067 Arabidopsis thaliana
AT4G21220 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11319068-11320067 Arabidopsis thaliana
AT4G21220 1.0kb downstream 1.0kb downstream 3240 true Chr4: 11315828-11319067 Arabidopsis thaliana
AT4G21220 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11315828-11316827 Arabidopsis thaliana
AT4G21220 2.0kb upstream 2.0kb upstream 4240 true Chr4: 11316828-11321067 Arabidopsis thaliana
AT4G21220 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11319068-11321067 Arabidopsis thaliana
AT4G21220 2.0kb downstream 2.0kb downstream 4240 true Chr4: 11314828-11319067 Arabidopsis thaliana
AT4G21220 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11314828-11316827 Arabidopsis thaliana
AT4G21220 5.0kb upstream 5.0kb upstream 7240 true Chr4: 11316828-11324067 Arabidopsis thaliana
AT4G21220 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11319068-11324067 Arabidopsis thaliana
AT4G21220 5.0kb downstream 5.0kb downstream 7240 true Chr4: 11311828-11319067 Arabidopsis thaliana
AT4G21220 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11311828-11316827 Arabidopsis thaliana
AT4G21220 10.0kb upstream 10.0kb upstream 12240 true Chr4: 11316828-11329067 Arabidopsis thaliana
AT4G21220 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11319068-11329067 Arabidopsis thaliana
AT4G21220 10.0kb downstream 10.0kb downstream 12240 true Chr4: 11306828-11319067 Arabidopsis thaliana
AT4G21220 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11306828-11316827 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375764 5261 Brassicaceae View MSA
123829957 5264 Brassicales-Malvales View MSA
124341788 5266 SBM View MSA
124240703 5268 Malvidae View MSA
124065572 5270 Rosid View MSA
123744940 5271 Pentapetalae View MSA
122787532 5272 Eudicot View MSA
122047698 5273 Angiosperm View MSA
121346059 5274 Embryophyte View MSA
123380314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.331        
cufflinks 2.579        
cufflinks 0.784       Low
cufflinks 2.803        
cufflinks 0.947        
cufflinks 2.58        

0 Strain