Gene : AT4G20930 A. thaliana TAIR10
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Genomic Order:  2042
Name:  ? AT4G20930 Secondary Identifier:  ? PAC:19646072
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20930 0.5kb upstream 0.5kb upstream 3199 true Chr4: 11198389-11201587 Arabidopsis thaliana
AT4G20930 0.5kb upstream 0.5kb upstream 500 false Chr4: 11201088-11201587 Arabidopsis thaliana
AT4G20930 0.5kb downstream 0.5kb downstream 3199 true Chr4: 11197889-11201087 Arabidopsis thaliana
AT4G20930 0.5kb downstream 0.5kb downstream 500 false Chr4: 11197889-11198388 Arabidopsis thaliana
AT4G20930 1.0kb upstream 1.0kb upstream 3699 true Chr4: 11198389-11202087 Arabidopsis thaliana
AT4G20930 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11201088-11202087 Arabidopsis thaliana
AT4G20930 1.0kb downstream 1.0kb downstream 3699 true Chr4: 11197389-11201087 Arabidopsis thaliana
AT4G20930 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11197389-11198388 Arabidopsis thaliana
AT4G20930 2.0kb upstream 2.0kb upstream 4699 true Chr4: 11198389-11203087 Arabidopsis thaliana
AT4G20930 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11201088-11203087 Arabidopsis thaliana
AT4G20930 2.0kb downstream 2.0kb downstream 4699 true Chr4: 11196389-11201087 Arabidopsis thaliana
AT4G20930 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11196389-11198388 Arabidopsis thaliana
AT4G20930 5.0kb upstream 5.0kb upstream 7699 true Chr4: 11198389-11206087 Arabidopsis thaliana
AT4G20930 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11201088-11206087 Arabidopsis thaliana
AT4G20930 5.0kb downstream 5.0kb downstream 7699 true Chr4: 11193389-11201087 Arabidopsis thaliana
AT4G20930 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11193389-11198388 Arabidopsis thaliana
AT4G20930 10.0kb upstream 10.0kb upstream 12699 true Chr4: 11198389-11211087 Arabidopsis thaliana
AT4G20930 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11201088-11211087 Arabidopsis thaliana
AT4G20930 10.0kb downstream 10.0kb downstream 12699 true Chr4: 11188389-11201087 Arabidopsis thaliana
AT4G20930 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11188389-11198388 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377505 5261 Brassicaceae View MSA
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.263        
cufflinks 4.99        
cufflinks 6.112        
cufflinks 5.105        
cufflinks 7.462       High
cufflinks 4.094       Low

0 Strain