Gene : AT4G20970 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2045
Name:  ? AT4G20970 Secondary Identifier:  ? PAC:19647516
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20970 0.5kb upstream 0.5kb upstream 1454 true Chr4: 11214759-11216212 Arabidopsis thaliana
AT4G20970 0.5kb upstream 0.5kb upstream 500 false Chr4: 11214759-11215258 Arabidopsis thaliana
AT4G20970 0.5kb downstream 0.5kb downstream 1454 true Chr4: 11215259-11216712 Arabidopsis thaliana
AT4G20970 0.5kb downstream 0.5kb downstream 500 false Chr4: 11216213-11216712 Arabidopsis thaliana
AT4G20970 1.0kb upstream 1.0kb upstream 1954 true Chr4: 11214259-11216212 Arabidopsis thaliana
AT4G20970 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11214259-11215258 Arabidopsis thaliana
AT4G20970 1.0kb downstream 1.0kb downstream 1954 true Chr4: 11215259-11217212 Arabidopsis thaliana
AT4G20970 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11216213-11217212 Arabidopsis thaliana
AT4G20970 2.0kb upstream 2.0kb upstream 2954 true Chr4: 11213259-11216212 Arabidopsis thaliana
AT4G20970 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11213259-11215258 Arabidopsis thaliana
AT4G20970 2.0kb downstream 2.0kb downstream 2954 true Chr4: 11215259-11218212 Arabidopsis thaliana
AT4G20970 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11216213-11218212 Arabidopsis thaliana
AT4G20970 5.0kb upstream 5.0kb upstream 5954 true Chr4: 11210259-11216212 Arabidopsis thaliana
AT4G20970 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11210259-11215258 Arabidopsis thaliana
AT4G20970 5.0kb downstream 5.0kb downstream 5954 true Chr4: 11215259-11221212 Arabidopsis thaliana
AT4G20970 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11216213-11221212 Arabidopsis thaliana
AT4G20970 10.0kb upstream 10.0kb upstream 10954 true Chr4: 11205259-11216212 Arabidopsis thaliana
AT4G20970 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11205259-11215258 Arabidopsis thaliana
AT4G20970 10.0kb downstream 10.0kb downstream 10954 true Chr4: 11215259-11226212 Arabidopsis thaliana
AT4G20970 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11216213-11226212 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122363928 5261 Brassicaceae View MSA
123839972 5264 Brassicales-Malvales View MSA
124343731 5266 SBM View MSA
124253277 5268 Malvidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.212        
cufflinks 0.048     Low  
cufflinks 1.905        
cufflinks 0.193     Low  
cufflinks 1.192        
cufflinks 0.018     Low Low

0 Strain