Gene : AT4G20980 A. thaliana TAIR10
Defline:  (1 of 2) K03251 - translation initiation factor 3 subunit D (EIF3D) Genomic Order:  2046
Name:  ? AT4G20980 Secondary Identifier:  ? PAC:19648422
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20980 0.5kb upstream 0.5kb upstream 3258 true Chr4: 11216381-11219638 Arabidopsis thaliana
AT4G20980 0.5kb upstream 0.5kb upstream 500 false Chr4: 11216381-11216880 Arabidopsis thaliana
AT4G20980 0.5kb downstream 0.5kb downstream 3258 true Chr4: 11216881-11220138 Arabidopsis thaliana
AT4G20980 0.5kb downstream 0.5kb downstream 500 false Chr4: 11219639-11220138 Arabidopsis thaliana
AT4G20980 1.0kb upstream 1.0kb upstream 3758 true Chr4: 11215881-11219638 Arabidopsis thaliana
AT4G20980 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11215881-11216880 Arabidopsis thaliana
AT4G20980 1.0kb downstream 1.0kb downstream 3758 true Chr4: 11216881-11220638 Arabidopsis thaliana
AT4G20980 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11219639-11220638 Arabidopsis thaliana
AT4G20980 2.0kb upstream 2.0kb upstream 4758 true Chr4: 11214881-11219638 Arabidopsis thaliana
AT4G20980 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11214881-11216880 Arabidopsis thaliana
AT4G20980 2.0kb downstream 2.0kb downstream 4758 true Chr4: 11216881-11221638 Arabidopsis thaliana
AT4G20980 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11219639-11221638 Arabidopsis thaliana
AT4G20980 5.0kb upstream 5.0kb upstream 7758 true Chr4: 11211881-11219638 Arabidopsis thaliana
AT4G20980 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11211881-11216880 Arabidopsis thaliana
AT4G20980 5.0kb downstream 5.0kb downstream 7758 true Chr4: 11216881-11224638 Arabidopsis thaliana
AT4G20980 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11219639-11224638 Arabidopsis thaliana
AT4G20980 10.0kb upstream 10.0kb upstream 12758 true Chr4: 11206881-11219638 Arabidopsis thaliana
AT4G20980 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11206881-11216880 Arabidopsis thaliana
AT4G20980 10.0kb downstream 10.0kb downstream 12758 true Chr4: 11216881-11229638 Arabidopsis thaliana
AT4G20980 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11219639-11229638 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041522 5273 Angiosperm View MSA
122379520 5261 Brassicaceae View MSA
123840078 5264 Brassicales-Malvales View MSA
124336794 5266 SBM View MSA
124242257 5268 Malvidae View MSA
124061322 5270 Rosid View MSA
123739526 5271 Pentapetalae View MSA
122787670 5272 Eudicot View MSA
121344825 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.295        
cufflinks 8.428        
cufflinks 8.434        
cufflinks 8.407        
cufflinks 6.736       Low
cufflinks 9.91       High

0 Strain