Gene : AT4G20840 A. thaliana TAIR10
Defline:  (1 of 5) PTHR32448:SF34 - F22M8.11 PROTEIN-RELATED Genomic Order:  2033
Name:  ? AT4G20840 Secondary Identifier:  ? PAC:19647334
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20840 0.5kb upstream 0.5kb upstream 2120 true Chr4: 11157416-11159535 Arabidopsis thaliana
AT4G20840 0.5kb upstream 0.5kb upstream 500 false Chr4: 11157416-11157915 Arabidopsis thaliana
AT4G20840 0.5kb downstream 0.5kb downstream 2120 true Chr4: 11157916-11160035 Arabidopsis thaliana
AT4G20840 0.5kb downstream 0.5kb downstream 500 false Chr4: 11159536-11160035 Arabidopsis thaliana
AT4G20840 1.0kb upstream 1.0kb upstream 2620 true Chr4: 11156916-11159535 Arabidopsis thaliana
AT4G20840 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11156916-11157915 Arabidopsis thaliana
AT4G20840 1.0kb downstream 1.0kb downstream 2620 true Chr4: 11157916-11160535 Arabidopsis thaliana
AT4G20840 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11159536-11160535 Arabidopsis thaliana
AT4G20840 2.0kb upstream 2.0kb upstream 3620 true Chr4: 11155916-11159535 Arabidopsis thaliana
AT4G20840 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11155916-11157915 Arabidopsis thaliana
AT4G20840 2.0kb downstream 2.0kb downstream 3620 true Chr4: 11157916-11161535 Arabidopsis thaliana
AT4G20840 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11159536-11161535 Arabidopsis thaliana
AT4G20840 5.0kb upstream 5.0kb upstream 6620 true Chr4: 11152916-11159535 Arabidopsis thaliana
AT4G20840 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11152916-11157915 Arabidopsis thaliana
AT4G20840 5.0kb downstream 5.0kb downstream 6620 true Chr4: 11157916-11164535 Arabidopsis thaliana
AT4G20840 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11159536-11164535 Arabidopsis thaliana
AT4G20840 10.0kb upstream 10.0kb upstream 11620 true Chr4: 11147916-11159535 Arabidopsis thaliana
AT4G20840 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11147916-11157915 Arabidopsis thaliana
AT4G20840 10.0kb downstream 10.0kb downstream 11620 true Chr4: 11157916-11169535 Arabidopsis thaliana
AT4G20840 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11159536-11169535 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361409 5261 Brassicaceae View MSA
123839925 5264 Brassicales-Malvales View MSA
124350288 5266 SBM View MSA
124247902 5268 Malvidae View MSA
124069535 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.337        
cufflinks 9.41        
cufflinks 10.889        
cufflinks 11.97        
cufflinks 7.549       Low
cufflinks 12.265        

0 Strain