Gene : AT4G20390 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11615//PTHR11615:SF120 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1995
Name:  ? AT4G20390 Secondary Identifier:  ? PAC:19648954
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20390 0.5kb upstream 0.5kb upstream 1532 true Chr4: 11006535-11008066 Arabidopsis thaliana
AT4G20390 0.5kb upstream 0.5kb upstream 500 false Chr4: 11006535-11007034 Arabidopsis thaliana
AT4G20390 0.5kb downstream 0.5kb downstream 1532 true Chr4: 11007035-11008566 Arabidopsis thaliana
AT4G20390 0.5kb downstream 0.5kb downstream 500 false Chr4: 11008067-11008566 Arabidopsis thaliana
AT4G20390 1.0kb upstream 1.0kb upstream 2032 true Chr4: 11006035-11008066 Arabidopsis thaliana
AT4G20390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11006035-11007034 Arabidopsis thaliana
AT4G20390 1.0kb downstream 1.0kb downstream 2032 true Chr4: 11007035-11009066 Arabidopsis thaliana
AT4G20390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11008067-11009066 Arabidopsis thaliana
AT4G20390 2.0kb upstream 2.0kb upstream 3032 true Chr4: 11005035-11008066 Arabidopsis thaliana
AT4G20390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11005035-11007034 Arabidopsis thaliana
AT4G20390 2.0kb downstream 2.0kb downstream 3032 true Chr4: 11007035-11010066 Arabidopsis thaliana
AT4G20390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11008067-11010066 Arabidopsis thaliana
AT4G20390 5.0kb upstream 5.0kb upstream 6032 true Chr4: 11002035-11008066 Arabidopsis thaliana
AT4G20390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11002035-11007034 Arabidopsis thaliana
AT4G20390 5.0kb downstream 5.0kb downstream 6032 true Chr4: 11007035-11013066 Arabidopsis thaliana
AT4G20390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11008067-11013066 Arabidopsis thaliana
AT4G20390 10.0kb upstream 10.0kb upstream 11032 true Chr4: 10997035-11008066 Arabidopsis thaliana
AT4G20390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10997035-11007034 Arabidopsis thaliana
AT4G20390 10.0kb downstream 10.0kb downstream 11032 true Chr4: 11007035-11018066 Arabidopsis thaliana
AT4G20390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11008067-11018066 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368635 5261 Brassicaceae View MSA
123839796 5264 Brassicales-Malvales View MSA
124338149 5266 SBM View MSA
124242083 5268 Malvidae View MSA
124065641 5270 Rosid View MSA
123739206 5271 Pentapetalae View MSA
122793621 5272 Eudicot View MSA
122046791 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165     Low Low
cufflinks 25.338        
cufflinks 0.354        
cufflinks 30.532     High  
cufflinks 0.366        
cufflinks 36.192     High  

0 Strain