Gene : PIP1;5 A. thaliana TAIR10
Primary Identifier:  ? AT4G23400 Defline:  (1 of 4) PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED
Genomic Order:  2318 Name:  ? AT4G23400
Secondary Identifier:  ? PAC:19645643
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23400 0.5kb upstream 0.5kb upstream 2129 true Chr4: 12220243-12222371 Arabidopsis thaliana
AT4G23400 0.5kb upstream 0.5kb upstream 500 false Chr4: 12220243-12220742 Arabidopsis thaliana
AT4G23400 0.5kb downstream 0.5kb downstream 2129 true Chr4: 12220743-12222871 Arabidopsis thaliana
AT4G23400 0.5kb downstream 0.5kb downstream 500 false Chr4: 12222372-12222871 Arabidopsis thaliana
AT4G23400 1.0kb upstream 1.0kb upstream 2629 true Chr4: 12219743-12222371 Arabidopsis thaliana
AT4G23400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12219743-12220742 Arabidopsis thaliana
AT4G23400 1.0kb downstream 1.0kb downstream 2629 true Chr4: 12220743-12223371 Arabidopsis thaliana
AT4G23400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12222372-12223371 Arabidopsis thaliana
AT4G23400 2.0kb upstream 2.0kb upstream 3629 true Chr4: 12218743-12222371 Arabidopsis thaliana
AT4G23400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12218743-12220742 Arabidopsis thaliana
AT4G23400 2.0kb downstream 2.0kb downstream 3629 true Chr4: 12220743-12224371 Arabidopsis thaliana
AT4G23400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12222372-12224371 Arabidopsis thaliana
AT4G23400 5.0kb upstream 5.0kb upstream 6629 true Chr4: 12215743-12222371 Arabidopsis thaliana
AT4G23400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12215743-12220742 Arabidopsis thaliana
AT4G23400 5.0kb downstream 5.0kb downstream 6629 true Chr4: 12220743-12227371 Arabidopsis thaliana
AT4G23400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12222372-12227371 Arabidopsis thaliana
AT4G23400 10.0kb upstream 10.0kb upstream 11629 true Chr4: 12210743-12222371 Arabidopsis thaliana
AT4G23400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12210743-12220742 Arabidopsis thaliana
AT4G23400 10.0kb downstream 10.0kb downstream 11629 true Chr4: 12220743-12232371 Arabidopsis thaliana
AT4G23400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12222372-12232371 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360189 5261 Brassicaceae View MSA
123797909 5264 Brassicales-Malvales View MSA
124295608 5266 SBM View MSA
124250285 5268 Malvidae View MSA
124069704 5270 Rosid View MSA
123745949 5271 Pentapetalae View MSA
122797491 5272 Eudicot View MSA
122048172 5273 Angiosperm View MSA
121347891 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.949     High High
cufflinks 40.538     High  
cufflinks 47.565     High  
cufflinks 50.673     High  
cufflinks 27.586     High Low
cufflinks 48.708     High  

0 Strain