Gene : NYE1 A. thaliana TAIR10
Primary Identifier:  ? AT4G22920 Defline:  (1 of 3) PTHR31750//PTHR31750:SF4 - FAMILY NOT NAMED // PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED
Genomic Order:  2268 Name:  ? AT4G22920
Secondary Identifier:  ? PAC:19647871
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22920 0.5kb upstream 0.5kb upstream 2468 true Chr4: 12016525-12018992 Arabidopsis thaliana
AT4G22920 0.5kb upstream 0.5kb upstream 500 false Chr4: 12018493-12018992 Arabidopsis thaliana
AT4G22920 0.5kb downstream 0.5kb downstream 2468 true Chr4: 12016025-12018492 Arabidopsis thaliana
AT4G22920 0.5kb downstream 0.5kb downstream 500 false Chr4: 12016025-12016524 Arabidopsis thaliana
AT4G22920 1.0kb upstream 1.0kb upstream 2968 true Chr4: 12016525-12019492 Arabidopsis thaliana
AT4G22920 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12018493-12019492 Arabidopsis thaliana
AT4G22920 1.0kb downstream 1.0kb downstream 2968 true Chr4: 12015525-12018492 Arabidopsis thaliana
AT4G22920 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12015525-12016524 Arabidopsis thaliana
AT4G22920 2.0kb upstream 2.0kb upstream 3968 true Chr4: 12016525-12020492 Arabidopsis thaliana
AT4G22920 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12018493-12020492 Arabidopsis thaliana
AT4G22920 2.0kb downstream 2.0kb downstream 3968 true Chr4: 12014525-12018492 Arabidopsis thaliana
AT4G22920 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12014525-12016524 Arabidopsis thaliana
AT4G22920 5.0kb upstream 5.0kb upstream 6968 true Chr4: 12016525-12023492 Arabidopsis thaliana
AT4G22920 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12018493-12023492 Arabidopsis thaliana
AT4G22920 5.0kb downstream 5.0kb downstream 6968 true Chr4: 12011525-12018492 Arabidopsis thaliana
AT4G22920 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12011525-12016524 Arabidopsis thaliana
AT4G22920 10.0kb upstream 10.0kb upstream 11968 true Chr4: 12016525-12028492 Arabidopsis thaliana
AT4G22920 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12018493-12028492 Arabidopsis thaliana
AT4G22920 10.0kb downstream 10.0kb downstream 11968 true Chr4: 12006525-12018492 Arabidopsis thaliana
AT4G22920 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12006525-12016524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360714 5261 Brassicaceae View MSA
123838568 5264 Brassicales-Malvales View MSA
124341022 5266 SBM View MSA
124253223 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.59        
cufflinks 6.386       Low
cufflinks 13.426        
cufflinks 9.503        
cufflinks 19.948       High
cufflinks 8.67        

0 Strain