Gene : AT4G22760 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2252
Name:  ? AT4G22760 Secondary Identifier:  ? PAC:19647478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22760 0.5kb upstream 0.5kb upstream 2237 true Chr4: 11960053-11962289 Arabidopsis thaliana
AT4G22760 0.5kb upstream 0.5kb upstream 500 false Chr4: 11960053-11960552 Arabidopsis thaliana
AT4G22760 0.5kb downstream 0.5kb downstream 2237 true Chr4: 11960553-11962789 Arabidopsis thaliana
AT4G22760 0.5kb downstream 0.5kb downstream 500 false Chr4: 11962290-11962789 Arabidopsis thaliana
AT4G22760 1.0kb upstream 1.0kb upstream 2737 true Chr4: 11959553-11962289 Arabidopsis thaliana
AT4G22760 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11959553-11960552 Arabidopsis thaliana
AT4G22760 1.0kb downstream 1.0kb downstream 2737 true Chr4: 11960553-11963289 Arabidopsis thaliana
AT4G22760 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11962290-11963289 Arabidopsis thaliana
AT4G22760 2.0kb upstream 2.0kb upstream 3737 true Chr4: 11958553-11962289 Arabidopsis thaliana
AT4G22760 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11958553-11960552 Arabidopsis thaliana
AT4G22760 2.0kb downstream 2.0kb downstream 3737 true Chr4: 11960553-11964289 Arabidopsis thaliana
AT4G22760 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11962290-11964289 Arabidopsis thaliana
AT4G22760 5.0kb upstream 5.0kb upstream 6737 true Chr4: 11955553-11962289 Arabidopsis thaliana
AT4G22760 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11955553-11960552 Arabidopsis thaliana
AT4G22760 5.0kb downstream 5.0kb downstream 6737 true Chr4: 11960553-11967289 Arabidopsis thaliana
AT4G22760 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11962290-11967289 Arabidopsis thaliana
AT4G22760 10.0kb upstream 10.0kb upstream 11737 true Chr4: 11950553-11962289 Arabidopsis thaliana
AT4G22760 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11950553-11960552 Arabidopsis thaliana
AT4G22760 10.0kb downstream 10.0kb downstream 11737 true Chr4: 11960553-11972289 Arabidopsis thaliana
AT4G22760 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11962290-11972289 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370178 5261 Brassicaceae View MSA
123827473 5264 Brassicales-Malvales View MSA
124321465 5266 SBM View MSA
124242229 5268 Malvidae View MSA
124069028 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11        
cufflinks 2.516       High
cufflinks 0.982        
cufflinks 2.066        
cufflinks 0.923       Low
cufflinks 1.933        

0 Strain