Gene : AT4G22770 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  2253
Name:  ? AT4G22770 Secondary Identifier:  ? PAC:19646987
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22770 0.5kb upstream 0.5kb upstream 2557 true Chr4: 11963628-11966184 Arabidopsis thaliana
AT4G22770 0.5kb upstream 0.5kb upstream 500 false Chr4: 11965685-11966184 Arabidopsis thaliana
AT4G22770 0.5kb downstream 0.5kb downstream 2557 true Chr4: 11963128-11965684 Arabidopsis thaliana
AT4G22770 0.5kb downstream 0.5kb downstream 500 false Chr4: 11963128-11963627 Arabidopsis thaliana
AT4G22770 1.0kb upstream 1.0kb upstream 3057 true Chr4: 11963628-11966684 Arabidopsis thaliana
AT4G22770 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11965685-11966684 Arabidopsis thaliana
AT4G22770 1.0kb downstream 1.0kb downstream 3057 true Chr4: 11962628-11965684 Arabidopsis thaliana
AT4G22770 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11962628-11963627 Arabidopsis thaliana
AT4G22770 2.0kb upstream 2.0kb upstream 4057 true Chr4: 11963628-11967684 Arabidopsis thaliana
AT4G22770 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11965685-11967684 Arabidopsis thaliana
AT4G22770 2.0kb downstream 2.0kb downstream 4057 true Chr4: 11961628-11965684 Arabidopsis thaliana
AT4G22770 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11961628-11963627 Arabidopsis thaliana
AT4G22770 5.0kb upstream 5.0kb upstream 7057 true Chr4: 11963628-11970684 Arabidopsis thaliana
AT4G22770 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11965685-11970684 Arabidopsis thaliana
AT4G22770 5.0kb downstream 5.0kb downstream 7057 true Chr4: 11958628-11965684 Arabidopsis thaliana
AT4G22770 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11958628-11963627 Arabidopsis thaliana
AT4G22770 10.0kb upstream 10.0kb upstream 12057 true Chr4: 11963628-11975684 Arabidopsis thaliana
AT4G22770 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11965685-11975684 Arabidopsis thaliana
AT4G22770 10.0kb downstream 10.0kb downstream 12057 true Chr4: 11953628-11965684 Arabidopsis thaliana
AT4G22770 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11953628-11963627 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360893 5261 Brassicaceae View MSA
123841387 5264 Brassicales-Malvales View MSA
124348766 5266 SBM View MSA
124248140 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.916        
cufflinks 3.629        
cufflinks 1.924        
cufflinks 3.783        
cufflinks 1.173       Low
cufflinks 4.688       High

0 Strain