Gene : AT4G22820 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10634//PTHR10634:SF38 - AN1-TYPE ZINC FINGER PROTEIN // ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1-RELATED Genomic Order:  2258
Name:  ? AT4G22820 Secondary Identifier:  ? PAC:19645799
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22820 0.5kb upstream 0.5kb upstream 1802 true Chr4: 11987705-11989506 Arabidopsis thaliana
AT4G22820 0.5kb upstream 0.5kb upstream 500 false Chr4: 11989007-11989506 Arabidopsis thaliana
AT4G22820 0.5kb downstream 0.5kb downstream 1802 true Chr4: 11987205-11989006 Arabidopsis thaliana
AT4G22820 0.5kb downstream 0.5kb downstream 500 false Chr4: 11987205-11987704 Arabidopsis thaliana
AT4G22820 1.0kb upstream 1.0kb upstream 2302 true Chr4: 11987705-11990006 Arabidopsis thaliana
AT4G22820 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11989007-11990006 Arabidopsis thaliana
AT4G22820 1.0kb downstream 1.0kb downstream 2302 true Chr4: 11986705-11989006 Arabidopsis thaliana
AT4G22820 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11986705-11987704 Arabidopsis thaliana
AT4G22820 2.0kb upstream 2.0kb upstream 3302 true Chr4: 11987705-11991006 Arabidopsis thaliana
AT4G22820 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11989007-11991006 Arabidopsis thaliana
AT4G22820 2.0kb downstream 2.0kb downstream 3302 true Chr4: 11985705-11989006 Arabidopsis thaliana
AT4G22820 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11985705-11987704 Arabidopsis thaliana
AT4G22820 5.0kb upstream 5.0kb upstream 6302 true Chr4: 11987705-11994006 Arabidopsis thaliana
AT4G22820 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11989007-11994006 Arabidopsis thaliana
AT4G22820 5.0kb downstream 5.0kb downstream 6302 true Chr4: 11982705-11989006 Arabidopsis thaliana
AT4G22820 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11982705-11987704 Arabidopsis thaliana
AT4G22820 10.0kb upstream 10.0kb upstream 11302 true Chr4: 11987705-11999006 Arabidopsis thaliana
AT4G22820 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11989007-11999006 Arabidopsis thaliana
AT4G22820 10.0kb downstream 10.0kb downstream 11302 true Chr4: 11977705-11989006 Arabidopsis thaliana
AT4G22820 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11977705-11987704 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370301 5261 Brassicaceae View MSA
123799935 5264 Brassicales-Malvales View MSA
124297403 5266 SBM View MSA
124251311 5268 Malvidae View MSA
124063038 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.433        
cufflinks 26.73        
cufflinks 8.881       Low
cufflinks 28.76        
cufflinks 10.975        
cufflinks 31.765     High High

0 Strain