Gene : AT4G22720 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11735//PTHR11735:SF14 - O-SIALOGLYCOPROTEIN ENDOPEPTIDASE // TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE-RELATED Genomic Order:  2244
Name:  ? AT4G22720 Secondary Identifier:  ? PAC:19645089
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1587 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22720 0.5kb upstream 0.5kb upstream 2525 true Chr4: 11936442-11938966 Arabidopsis thaliana
AT4G22720 0.5kb upstream 0.5kb upstream 500 false Chr4: 11936442-11936941 Arabidopsis thaliana
AT4G22720 0.5kb downstream 0.5kb downstream 2525 true Chr4: 11936942-11939466 Arabidopsis thaliana
AT4G22720 0.5kb downstream 0.5kb downstream 500 false Chr4: 11938967-11939466 Arabidopsis thaliana
AT4G22720 1.0kb upstream 1.0kb upstream 3025 true Chr4: 11935942-11938966 Arabidopsis thaliana
AT4G22720 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11935942-11936941 Arabidopsis thaliana
AT4G22720 1.0kb downstream 1.0kb downstream 3025 true Chr4: 11936942-11939966 Arabidopsis thaliana
AT4G22720 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11938967-11939966 Arabidopsis thaliana
AT4G22720 2.0kb upstream 2.0kb upstream 4025 true Chr4: 11934942-11938966 Arabidopsis thaliana
AT4G22720 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11934942-11936941 Arabidopsis thaliana
AT4G22720 2.0kb downstream 2.0kb downstream 4025 true Chr4: 11936942-11940966 Arabidopsis thaliana
AT4G22720 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11938967-11940966 Arabidopsis thaliana
AT4G22720 5.0kb upstream 5.0kb upstream 7025 true Chr4: 11931942-11938966 Arabidopsis thaliana
AT4G22720 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11931942-11936941 Arabidopsis thaliana
AT4G22720 5.0kb downstream 5.0kb downstream 7025 true Chr4: 11936942-11943966 Arabidopsis thaliana
AT4G22720 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11938967-11943966 Arabidopsis thaliana
AT4G22720 10.0kb upstream 10.0kb upstream 12025 true Chr4: 11926942-11938966 Arabidopsis thaliana
AT4G22720 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11926942-11936941 Arabidopsis thaliana
AT4G22720 10.0kb downstream 10.0kb downstream 12025 true Chr4: 11936942-11948966 Arabidopsis thaliana
AT4G22720 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11938967-11948966 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370127 5261 Brassicaceae View MSA
123829885 5264 Brassicales-Malvales View MSA
124350646 5266 SBM View MSA
124246525 5268 Malvidae View MSA
124066071 5270 Rosid View MSA
123747951 5271 Pentapetalae View MSA
122791458 5272 Eudicot View MSA
122043416 5273 Angiosperm View MSA
121345797 5274 Embryophyte View MSA
123425080 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.542        
cufflinks 8.171        
cufflinks 3.64       Low
cufflinks 8.066        
cufflinks 3.811       Low
cufflinks 7.909        

0 Strain