Gene : AT4G22517 A. thaliana TAIR10
Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  2221
Name:  ? AT4G22517 Secondary Identifier:  ? PAC:19644846
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22517 0.5kb upstream 0.5kb upstream 1071 true Chr4: 11856243-11857313 Arabidopsis thaliana
AT4G22517 0.5kb upstream 0.5kb upstream 500 false Chr4: 11856243-11856742 Arabidopsis thaliana
AT4G22517 0.5kb downstream 0.5kb downstream 1071 true Chr4: 11856743-11857813 Arabidopsis thaliana
AT4G22517 0.5kb downstream 0.5kb downstream 500 false Chr4: 11857314-11857813 Arabidopsis thaliana
AT4G22517 1.0kb upstream 1.0kb upstream 1571 true Chr4: 11855743-11857313 Arabidopsis thaliana
AT4G22517 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11855743-11856742 Arabidopsis thaliana
AT4G22517 1.0kb downstream 1.0kb downstream 1571 true Chr4: 11856743-11858313 Arabidopsis thaliana
AT4G22517 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11857314-11858313 Arabidopsis thaliana
AT4G22517 2.0kb upstream 2.0kb upstream 2571 true Chr4: 11854743-11857313 Arabidopsis thaliana
AT4G22517 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11854743-11856742 Arabidopsis thaliana
AT4G22517 2.0kb downstream 2.0kb downstream 2571 true Chr4: 11856743-11859313 Arabidopsis thaliana
AT4G22517 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11857314-11859313 Arabidopsis thaliana
AT4G22517 5.0kb upstream 5.0kb upstream 5571 true Chr4: 11851743-11857313 Arabidopsis thaliana
AT4G22517 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11851743-11856742 Arabidopsis thaliana
AT4G22517 5.0kb downstream 5.0kb downstream 5571 true Chr4: 11856743-11862313 Arabidopsis thaliana
AT4G22517 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11857314-11862313 Arabidopsis thaliana
AT4G22517 10.0kb upstream 10.0kb upstream 10571 true Chr4: 11846743-11857313 Arabidopsis thaliana
AT4G22517 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11846743-11856742 Arabidopsis thaliana
AT4G22517 10.0kb downstream 10.0kb downstream 10571 true Chr4: 11856743-11867313 Arabidopsis thaliana
AT4G22517 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11857314-11867313 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511734 5273 Angiosperm View MSA
122378489 5261 Brassicaceae View MSA
123801880 5264 Brassicales-Malvales View MSA
124299133 5266 SBM View MSA
124150626 5268 Malvidae View MSA
123876208 5270 Rosid View MSA
123459911 5271 Pentapetalae View MSA
122495293 5272 Eudicot View MSA
120784767 5274 Embryophyte View MSA
122826662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.548        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.607        
cufflinks 0.293     Low Low

0 Strain