Gene : AT4G22520 A. thaliana TAIR10
Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  2222
Name:  ? AT4G22520 Secondary Identifier:  ? PAC:19647276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22520 0.5kb upstream 0.5kb upstream 857 true Chr4: 11858114-11858970 Arabidopsis thaliana
AT4G22520 0.5kb upstream 0.5kb upstream 500 false Chr4: 11858114-11858613 Arabidopsis thaliana
AT4G22520 0.5kb downstream 0.5kb downstream 857 true Chr4: 11858614-11859470 Arabidopsis thaliana
AT4G22520 0.5kb downstream 0.5kb downstream 500 false Chr4: 11858971-11859470 Arabidopsis thaliana
AT4G22520 1.0kb upstream 1.0kb upstream 1357 true Chr4: 11857614-11858970 Arabidopsis thaliana
AT4G22520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11857614-11858613 Arabidopsis thaliana
AT4G22520 1.0kb downstream 1.0kb downstream 1357 true Chr4: 11858614-11859970 Arabidopsis thaliana
AT4G22520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11858971-11859970 Arabidopsis thaliana
AT4G22520 2.0kb upstream 2.0kb upstream 2357 true Chr4: 11856614-11858970 Arabidopsis thaliana
AT4G22520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11856614-11858613 Arabidopsis thaliana
AT4G22520 2.0kb downstream 2.0kb downstream 2357 true Chr4: 11858614-11860970 Arabidopsis thaliana
AT4G22520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11858971-11860970 Arabidopsis thaliana
AT4G22520 5.0kb upstream 5.0kb upstream 5357 true Chr4: 11853614-11858970 Arabidopsis thaliana
AT4G22520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11853614-11858613 Arabidopsis thaliana
AT4G22520 5.0kb downstream 5.0kb downstream 5357 true Chr4: 11858614-11863970 Arabidopsis thaliana
AT4G22520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11858971-11863970 Arabidopsis thaliana
AT4G22520 10.0kb upstream 10.0kb upstream 10357 true Chr4: 11848614-11858970 Arabidopsis thaliana
AT4G22520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11848614-11858613 Arabidopsis thaliana
AT4G22520 10.0kb downstream 10.0kb downstream 10357 true Chr4: 11858614-11868970 Arabidopsis thaliana
AT4G22520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11858971-11868970 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511734 5273 Angiosperm View MSA
122378489 5261 Brassicaceae View MSA
123801880 5264 Brassicales-Malvales View MSA
124299133 5266 SBM View MSA
124150626 5268 Malvidae View MSA
123876208 5270 Rosid View MSA
123459911 5271 Pentapetalae View MSA
122495293 5272 Eudicot View MSA
120784767 5274 Embryophyte View MSA
122826662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.049        
cufflinks 0.042     Low Low
cufflinks 3.025        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.988        
cufflinks 0.043     Low Low

0 Strain