Gene : CDS2 A. thaliana TAIR10
Primary Identifier:  ? AT4G22340 Defline:  (1 of 3) K00981 - phosphatidate cytidylyltransferase (E2.7.7.41, CDS1, CDS2, cdsA)
Genomic Order:  2203 Name:  ? AT4G22340
Secondary Identifier:  ? PAC:19646308
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1319 Arabidopsis thaliana pathologic  
Athaliana PWY4FS-7 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22340 0.5kb upstream 0.5kb upstream 3987 true Chr4: 11799959-11803945 Arabidopsis thaliana
AT4G22340 0.5kb upstream 0.5kb upstream 500 false Chr4: 11803446-11803945 Arabidopsis thaliana
AT4G22340 0.5kb downstream 0.5kb downstream 3987 true Chr4: 11799459-11803445 Arabidopsis thaliana
AT4G22340 0.5kb downstream 0.5kb downstream 500 false Chr4: 11799459-11799958 Arabidopsis thaliana
AT4G22340 1.0kb upstream 1.0kb upstream 4487 true Chr4: 11799959-11804445 Arabidopsis thaliana
AT4G22340 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11803446-11804445 Arabidopsis thaliana
AT4G22340 1.0kb downstream 1.0kb downstream 4487 true Chr4: 11798959-11803445 Arabidopsis thaliana
AT4G22340 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11798959-11799958 Arabidopsis thaliana
AT4G22340 2.0kb upstream 2.0kb upstream 5487 true Chr4: 11799959-11805445 Arabidopsis thaliana
AT4G22340 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11803446-11805445 Arabidopsis thaliana
AT4G22340 2.0kb downstream 2.0kb downstream 5487 true Chr4: 11797959-11803445 Arabidopsis thaliana
AT4G22340 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11797959-11799958 Arabidopsis thaliana
AT4G22340 5.0kb upstream 5.0kb upstream 8487 true Chr4: 11799959-11808445 Arabidopsis thaliana
AT4G22340 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11803446-11808445 Arabidopsis thaliana
AT4G22340 5.0kb downstream 5.0kb downstream 8487 true Chr4: 11794959-11803445 Arabidopsis thaliana
AT4G22340 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11794959-11799958 Arabidopsis thaliana
AT4G22340 10.0kb upstream 10.0kb upstream 13487 true Chr4: 11799959-11813445 Arabidopsis thaliana
AT4G22340 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11803446-11813445 Arabidopsis thaliana
AT4G22340 10.0kb downstream 10.0kb downstream 13487 true Chr4: 11789959-11803445 Arabidopsis thaliana
AT4G22340 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11789959-11799958 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372701 5261 Brassicaceae View MSA
123841401 5264 Brassicales-Malvales View MSA
124337420 5266 SBM View MSA
124243920 5268 Malvidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.968       Low
cufflinks 1.847        
cufflinks 1.17        
cufflinks 2.212       High
cufflinks 1.127        
cufflinks 1.464        

0 Strain