Gene : AT4G22280 A. thaliana TAIR10
Defline:  (1 of 43) PTHR31639//PTHR31639:SF6 - FAMILY NOT NAMED // FBD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2195
Name:  ? AT4G22280 Secondary Identifier:  ? PAC:19645133
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22280 0.5kb upstream 0.5kb upstream 2655 true Chr4: 11775969-11778623 Arabidopsis thaliana
AT4G22280 0.5kb upstream 0.5kb upstream 500 false Chr4: 11778124-11778623 Arabidopsis thaliana
AT4G22280 0.5kb downstream 0.5kb downstream 2655 true Chr4: 11775469-11778123 Arabidopsis thaliana
AT4G22280 0.5kb downstream 0.5kb downstream 500 false Chr4: 11775469-11775968 Arabidopsis thaliana
AT4G22280 1.0kb upstream 1.0kb upstream 3155 true Chr4: 11775969-11779123 Arabidopsis thaliana
AT4G22280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11778124-11779123 Arabidopsis thaliana
AT4G22280 1.0kb downstream 1.0kb downstream 3155 true Chr4: 11774969-11778123 Arabidopsis thaliana
AT4G22280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11774969-11775968 Arabidopsis thaliana
AT4G22280 2.0kb upstream 2.0kb upstream 4155 true Chr4: 11775969-11780123 Arabidopsis thaliana
AT4G22280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11778124-11780123 Arabidopsis thaliana
AT4G22280 2.0kb downstream 2.0kb downstream 4155 true Chr4: 11773969-11778123 Arabidopsis thaliana
AT4G22280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11773969-11775968 Arabidopsis thaliana
AT4G22280 5.0kb upstream 5.0kb upstream 7155 true Chr4: 11775969-11783123 Arabidopsis thaliana
AT4G22280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11778124-11783123 Arabidopsis thaliana
AT4G22280 5.0kb downstream 5.0kb downstream 7155 true Chr4: 11770969-11778123 Arabidopsis thaliana
AT4G22280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11770969-11775968 Arabidopsis thaliana
AT4G22280 10.0kb upstream 10.0kb upstream 12155 true Chr4: 11775969-11788123 Arabidopsis thaliana
AT4G22280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11778124-11788123 Arabidopsis thaliana
AT4G22280 10.0kb downstream 10.0kb downstream 12155 true Chr4: 11765969-11778123 Arabidopsis thaliana
AT4G22280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11765969-11775968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367979 5261 Brassicaceae View MSA
123840956 5264 Brassicales-Malvales View MSA
124350537 5266 SBM View MSA
124254039 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.51        
cufflinks 1.047       High
cufflinks 0.368       Low
cufflinks 0.961        
cufflinks 0.437        
cufflinks 0.82        

0 Strain