Gene : SOBER1 A. thaliana TAIR10
Primary Identifier:  ? AT4G22300 Defline:  (1 of 3) PTHR10655//PTHR10655:SF20 - LYSOPHOSPHOLIPASE-RELATED // CARBOXYLESTERASE
Genomic Order:  2198 Name:  ? AT4G22300
Secondary Identifier:  ? PAC:19646372
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6303 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G22300 0.5kb upstream 0.5kb upstream 2468 true Chr4: 11787313-11789780 Arabidopsis thaliana
AT4G22300 0.5kb upstream 0.5kb upstream 500 false Chr4: 11789281-11789780 Arabidopsis thaliana
AT4G22300 0.5kb downstream 0.5kb downstream 2468 true Chr4: 11786813-11789280 Arabidopsis thaliana
AT4G22300 0.5kb downstream 0.5kb downstream 500 false Chr4: 11786813-11787312 Arabidopsis thaliana
AT4G22300 1.0kb upstream 1.0kb upstream 2968 true Chr4: 11787313-11790280 Arabidopsis thaliana
AT4G22300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11789281-11790280 Arabidopsis thaliana
AT4G22300 1.0kb downstream 1.0kb downstream 2968 true Chr4: 11786313-11789280 Arabidopsis thaliana
AT4G22300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11786313-11787312 Arabidopsis thaliana
AT4G22300 2.0kb upstream 2.0kb upstream 3968 true Chr4: 11787313-11791280 Arabidopsis thaliana
AT4G22300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11789281-11791280 Arabidopsis thaliana
AT4G22300 2.0kb downstream 2.0kb downstream 3968 true Chr4: 11785313-11789280 Arabidopsis thaliana
AT4G22300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11785313-11787312 Arabidopsis thaliana
AT4G22300 5.0kb upstream 5.0kb upstream 6968 true Chr4: 11787313-11794280 Arabidopsis thaliana
AT4G22300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11789281-11794280 Arabidopsis thaliana
AT4G22300 5.0kb downstream 5.0kb downstream 6968 true Chr4: 11782313-11789280 Arabidopsis thaliana
AT4G22300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11782313-11787312 Arabidopsis thaliana
AT4G22300 10.0kb upstream 10.0kb upstream 11968 true Chr4: 11787313-11799280 Arabidopsis thaliana
AT4G22300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11789281-11799280 Arabidopsis thaliana
AT4G22300 10.0kb downstream 10.0kb downstream 11968 true Chr4: 11777313-11789280 Arabidopsis thaliana
AT4G22300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11777313-11787312 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376383 5261 Brassicaceae View MSA
123831256 5264 Brassicales-Malvales View MSA
124346497 5266 SBM View MSA
124241840 5268 Malvidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.94        
cufflinks 11.788        
cufflinks 5.625       Low
cufflinks 11.297        
cufflinks 6.257        
cufflinks 11.372        

0 Strain