Gene : AT4G24900 A. thaliana TAIR10
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  2478
Name:  ? AT4G24900 Secondary Identifier:  ? PAC:19644328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24900 0.5kb upstream 0.5kb upstream 3285 true Chr4: 12814338-12817622 Arabidopsis thaliana
AT4G24900 0.5kb upstream 0.5kb upstream 500 false Chr4: 12814338-12814837 Arabidopsis thaliana
AT4G24900 0.5kb downstream 0.5kb downstream 3285 true Chr4: 12814838-12818122 Arabidopsis thaliana
AT4G24900 0.5kb downstream 0.5kb downstream 500 false Chr4: 12817623-12818122 Arabidopsis thaliana
AT4G24900 1.0kb upstream 1.0kb upstream 3785 true Chr4: 12813838-12817622 Arabidopsis thaliana
AT4G24900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12813838-12814837 Arabidopsis thaliana
AT4G24900 1.0kb downstream 1.0kb downstream 3785 true Chr4: 12814838-12818622 Arabidopsis thaliana
AT4G24900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12817623-12818622 Arabidopsis thaliana
AT4G24900 2.0kb upstream 2.0kb upstream 4785 true Chr4: 12812838-12817622 Arabidopsis thaliana
AT4G24900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12812838-12814837 Arabidopsis thaliana
AT4G24900 2.0kb downstream 2.0kb downstream 4785 true Chr4: 12814838-12819622 Arabidopsis thaliana
AT4G24900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12817623-12819622 Arabidopsis thaliana
AT4G24900 5.0kb upstream 5.0kb upstream 7785 true Chr4: 12809838-12817622 Arabidopsis thaliana
AT4G24900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12809838-12814837 Arabidopsis thaliana
AT4G24900 5.0kb downstream 5.0kb downstream 7785 true Chr4: 12814838-12822622 Arabidopsis thaliana
AT4G24900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12817623-12822622 Arabidopsis thaliana
AT4G24900 10.0kb upstream 10.0kb upstream 12785 true Chr4: 12804838-12817622 Arabidopsis thaliana
AT4G24900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12804838-12814837 Arabidopsis thaliana
AT4G24900 10.0kb downstream 10.0kb downstream 12785 true Chr4: 12814838-12827622 Arabidopsis thaliana
AT4G24900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12817623-12827622 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379992 5261 Brassicaceae View MSA
123829941 5264 Brassicales-Malvales View MSA
124338732 5266 SBM View MSA
124244193 5268 Malvidae View MSA
124062307 5270 Rosid View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.732        
cufflinks 5.267       High
cufflinks 3.624        
cufflinks 5.289       High
cufflinks 3.741        
cufflinks 4.428        

0 Strain