Gene : REN1 A. thaliana TAIR10
Primary Identifier:  ? AT4G24580 Defline:  (1 of 1) PTHR23176//PTHR23176:SF42 - RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN // RHO GTPASE-ACTIVATING PROTEIN REN1
Genomic Order:  2447 Name:  ? AT4G24580
Secondary Identifier:  ? PAC:19644681
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24580 0.5kb upstream 0.5kb upstream 6870 true Chr4: 12687879-12694748 Arabidopsis thaliana
AT4G24580 0.5kb upstream 0.5kb upstream 500 false Chr4: 12694249-12694748 Arabidopsis thaliana
AT4G24580 0.5kb downstream 0.5kb downstream 6870 true Chr4: 12687379-12694248 Arabidopsis thaliana
AT4G24580 0.5kb downstream 0.5kb downstream 500 false Chr4: 12687379-12687878 Arabidopsis thaliana
AT4G24580 1.0kb upstream 1.0kb upstream 7370 true Chr4: 12687879-12695248 Arabidopsis thaliana
AT4G24580 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12694249-12695248 Arabidopsis thaliana
AT4G24580 1.0kb downstream 1.0kb downstream 7370 true Chr4: 12686879-12694248 Arabidopsis thaliana
AT4G24580 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12686879-12687878 Arabidopsis thaliana
AT4G24580 2.0kb upstream 2.0kb upstream 8370 true Chr4: 12687879-12696248 Arabidopsis thaliana
AT4G24580 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12694249-12696248 Arabidopsis thaliana
AT4G24580 2.0kb downstream 2.0kb downstream 8370 true Chr4: 12685879-12694248 Arabidopsis thaliana
AT4G24580 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12685879-12687878 Arabidopsis thaliana
AT4G24580 5.0kb upstream 5.0kb upstream 11370 true Chr4: 12687879-12699248 Arabidopsis thaliana
AT4G24580 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12694249-12699248 Arabidopsis thaliana
AT4G24580 5.0kb downstream 5.0kb downstream 11370 true Chr4: 12682879-12694248 Arabidopsis thaliana
AT4G24580 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12682879-12687878 Arabidopsis thaliana
AT4G24580 10.0kb upstream 10.0kb upstream 16370 true Chr4: 12687879-12704248 Arabidopsis thaliana
AT4G24580 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12694249-12704248 Arabidopsis thaliana
AT4G24580 10.0kb downstream 10.0kb downstream 16370 true Chr4: 12677879-12694248 Arabidopsis thaliana
AT4G24580 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12677879-12687878 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375408 5261 Brassicaceae View MSA
123835300 5264 Brassicales-Malvales View MSA
124343934 5266 SBM View MSA
124252587 5268 Malvidae View MSA
124067310 5270 Rosid View MSA
123749156 5271 Pentapetalae View MSA
122794752 5272 Eudicot View MSA
122042223 5273 Angiosperm View MSA
121347338 5274 Embryophyte View MSA
123380531 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.075     Low  
cufflinks 0.331     Low  
cufflinks 0.048     Low  
cufflinks 0.742       High
cufflinks 0.046     Low Low
cufflinks 0.696       High

0 Strain