Gene : PWD A. thaliana TAIR10
Primary Identifier:  ? AT4G24450 Defline:  (1 of 1) PTHR22931//PTHR22931:SF26 - PHOSPHOENOLPYRUVATE DIKINASE-RELATED // ALPHA-GLUCAN WATER DIKINASE 2
Genomic Order:  2434 Name:  ? AT4G24450
Secondary Identifier:  ? PAC:19644467
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6724 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24450 0.5kb upstream 0.5kb upstream 7872 true Chr4: 12634926-12642797 Arabidopsis thaliana
AT4G24450 0.5kb upstream 0.5kb upstream 500 false Chr4: 12634926-12635425 Arabidopsis thaliana
AT4G24450 0.5kb downstream 0.5kb downstream 7872 true Chr4: 12635426-12643297 Arabidopsis thaliana
AT4G24450 0.5kb downstream 0.5kb downstream 500 false Chr4: 12642798-12643297 Arabidopsis thaliana
AT4G24450 1.0kb upstream 1.0kb upstream 8372 true Chr4: 12634426-12642797 Arabidopsis thaliana
AT4G24450 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12634426-12635425 Arabidopsis thaliana
AT4G24450 1.0kb downstream 1.0kb downstream 8372 true Chr4: 12635426-12643797 Arabidopsis thaliana
AT4G24450 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12642798-12643797 Arabidopsis thaliana
AT4G24450 2.0kb upstream 2.0kb upstream 9372 true Chr4: 12633426-12642797 Arabidopsis thaliana
AT4G24450 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12633426-12635425 Arabidopsis thaliana
AT4G24450 2.0kb downstream 2.0kb downstream 9372 true Chr4: 12635426-12644797 Arabidopsis thaliana
AT4G24450 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12642798-12644797 Arabidopsis thaliana
AT4G24450 5.0kb upstream 5.0kb upstream 12372 true Chr4: 12630426-12642797 Arabidopsis thaliana
AT4G24450 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12630426-12635425 Arabidopsis thaliana
AT4G24450 5.0kb downstream 5.0kb downstream 12372 true Chr4: 12635426-12647797 Arabidopsis thaliana
AT4G24450 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12642798-12647797 Arabidopsis thaliana
AT4G24450 10.0kb upstream 10.0kb upstream 17372 true Chr4: 12625426-12642797 Arabidopsis thaliana
AT4G24450 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12625426-12635425 Arabidopsis thaliana
AT4G24450 10.0kb downstream 10.0kb downstream 17372 true Chr4: 12635426-12652797 Arabidopsis thaliana
AT4G24450 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12642798-12652797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363854 5261 Brassicaceae View MSA
123832740 5264 Brassicales-Malvales View MSA
124343081 5266 SBM View MSA
124244295 5268 Malvidae View MSA
124037198 5270 Rosid View MSA
123610225 5271 Pentapetalae View MSA
122795475 5272 Eudicot View MSA
122050212 5273 Angiosperm View MSA
123429091 5275 Viridiplantae View MSA
121311800 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.108        
cufflinks 2.445        
cufflinks 3.797        
cufflinks 1.817        
cufflinks 4.748       High
cufflinks 1.412       Low

0 Strain