Gene : cpHsc70-1 A. thaliana TAIR10
Primary Identifier:  ? AT4G24280 Defline:  (1 of 2) PTHR19375//PTHR19375:SF204 - HEAT SHOCK PROTEIN 70KDA // HEAT SHOCK 70 KDA PROTEIN 6, CHLOROPLASTIC-RELATED
Genomic Order:  2418 Name:  ? AT4G24280
Secondary Identifier:  ? PAC:19645573
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24280 0.5kb upstream 0.5kb upstream 4143 true Chr4: 12589488-12593630 Arabidopsis thaliana
AT4G24280 0.5kb upstream 0.5kb upstream 500 false Chr4: 12589488-12589987 Arabidopsis thaliana
AT4G24280 0.5kb downstream 0.5kb downstream 4143 true Chr4: 12589988-12594130 Arabidopsis thaliana
AT4G24280 0.5kb downstream 0.5kb downstream 500 false Chr4: 12593631-12594130 Arabidopsis thaliana
AT4G24280 1.0kb upstream 1.0kb upstream 4643 true Chr4: 12588988-12593630 Arabidopsis thaliana
AT4G24280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12588988-12589987 Arabidopsis thaliana
AT4G24280 1.0kb downstream 1.0kb downstream 4643 true Chr4: 12589988-12594630 Arabidopsis thaliana
AT4G24280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12593631-12594630 Arabidopsis thaliana
AT4G24280 2.0kb upstream 2.0kb upstream 5643 true Chr4: 12587988-12593630 Arabidopsis thaliana
AT4G24280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12587988-12589987 Arabidopsis thaliana
AT4G24280 2.0kb downstream 2.0kb downstream 5643 true Chr4: 12589988-12595630 Arabidopsis thaliana
AT4G24280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12593631-12595630 Arabidopsis thaliana
AT4G24280 5.0kb upstream 5.0kb upstream 8643 true Chr4: 12584988-12593630 Arabidopsis thaliana
AT4G24280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12584988-12589987 Arabidopsis thaliana
AT4G24280 5.0kb downstream 5.0kb downstream 8643 true Chr4: 12589988-12598630 Arabidopsis thaliana
AT4G24280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12593631-12598630 Arabidopsis thaliana
AT4G24280 10.0kb upstream 10.0kb upstream 13643 true Chr4: 12579988-12593630 Arabidopsis thaliana
AT4G24280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12579988-12589987 Arabidopsis thaliana
AT4G24280 10.0kb downstream 10.0kb downstream 13643 true Chr4: 12589988-12603630 Arabidopsis thaliana
AT4G24280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12593631-12603630 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376512 5261 Brassicaceae View MSA
123841703 5264 Brassicales-Malvales View MSA
124339714 5266 SBM View MSA
124251993 5268 Malvidae View MSA
124064734 5270 Rosid View MSA
123747675 5271 Pentapetalae View MSA
122793873 5272 Eudicot View MSA
122046193 5273 Angiosperm View MSA
121347637 5274 Embryophyte View MSA
123424086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.78     High  
cufflinks 44.51     High  
cufflinks 121.278     High High
cufflinks 45.68     High  
cufflinks 94.108     High  
cufflinks 44.525     High  

0 Strain