Gene : AT4G24290 A. thaliana TAIR10
Defline:  (1 of 4) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  2419
Name:  ? AT4G24290 Secondary Identifier:  ? PAC:19647306
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24290 0.5kb upstream 0.5kb upstream 4247 true Chr4: 12593782-12598028 Arabidopsis thaliana
AT4G24290 0.5kb upstream 0.5kb upstream 500 false Chr4: 12593782-12594281 Arabidopsis thaliana
AT4G24290 0.5kb downstream 0.5kb downstream 4247 true Chr4: 12594282-12598528 Arabidopsis thaliana
AT4G24290 0.5kb downstream 0.5kb downstream 500 false Chr4: 12598029-12598528 Arabidopsis thaliana
AT4G24290 1.0kb upstream 1.0kb upstream 4747 true Chr4: 12593282-12598028 Arabidopsis thaliana
AT4G24290 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12593282-12594281 Arabidopsis thaliana
AT4G24290 1.0kb downstream 1.0kb downstream 4747 true Chr4: 12594282-12599028 Arabidopsis thaliana
AT4G24290 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12598029-12599028 Arabidopsis thaliana
AT4G24290 2.0kb upstream 2.0kb upstream 5747 true Chr4: 12592282-12598028 Arabidopsis thaliana
AT4G24290 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12592282-12594281 Arabidopsis thaliana
AT4G24290 2.0kb downstream 2.0kb downstream 5747 true Chr4: 12594282-12600028 Arabidopsis thaliana
AT4G24290 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12598029-12600028 Arabidopsis thaliana
AT4G24290 5.0kb upstream 5.0kb upstream 8747 true Chr4: 12589282-12598028 Arabidopsis thaliana
AT4G24290 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12589282-12594281 Arabidopsis thaliana
AT4G24290 5.0kb downstream 5.0kb downstream 8747 true Chr4: 12594282-12603028 Arabidopsis thaliana
AT4G24290 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12598029-12603028 Arabidopsis thaliana
AT4G24290 10.0kb upstream 10.0kb upstream 13747 true Chr4: 12584282-12598028 Arabidopsis thaliana
AT4G24290 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12584282-12594281 Arabidopsis thaliana
AT4G24290 10.0kb downstream 10.0kb downstream 13747 true Chr4: 12594282-12608028 Arabidopsis thaliana
AT4G24290 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12598029-12608028 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367966 5261 Brassicaceae View MSA
123831701 5264 Brassicales-Malvales View MSA
124339713 5266 SBM View MSA
124252893 5268 Malvidae View MSA
124064187 5270 Rosid View MSA
123748363 5271 Pentapetalae View MSA
122787729 5272 Eudicot View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.269        
cufflinks 18.338        
cufflinks 9.388       Low
cufflinks 19.365        
cufflinks 10.117        
cufflinks 18.524        

0 Strain