Gene : TRE1 A. thaliana TAIR10
Primary Identifier:  ? AT4G24040 Defline:  (1 of 1) 3.2.1.28 - Alpha,alpha-trehalase / Trehalase
Genomic Order:  2389 Name:  ? AT4G24040
Secondary Identifier:  ? PAC:19646886
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24040 0.5kb upstream 0.5kb upstream 3553 true Chr4: 12487683-12491235 Arabidopsis thaliana
AT4G24040 0.5kb upstream 0.5kb upstream 500 false Chr4: 12487683-12488182 Arabidopsis thaliana
AT4G24040 0.5kb downstream 0.5kb downstream 3553 true Chr4: 12488183-12491735 Arabidopsis thaliana
AT4G24040 0.5kb downstream 0.5kb downstream 500 false Chr4: 12491236-12491735 Arabidopsis thaliana
AT4G24040 1.0kb upstream 1.0kb upstream 4053 true Chr4: 12487183-12491235 Arabidopsis thaliana
AT4G24040 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12487183-12488182 Arabidopsis thaliana
AT4G24040 1.0kb downstream 1.0kb downstream 4053 true Chr4: 12488183-12492235 Arabidopsis thaliana
AT4G24040 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12491236-12492235 Arabidopsis thaliana
AT4G24040 2.0kb upstream 2.0kb upstream 5053 true Chr4: 12486183-12491235 Arabidopsis thaliana
AT4G24040 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12486183-12488182 Arabidopsis thaliana
AT4G24040 2.0kb downstream 2.0kb downstream 5053 true Chr4: 12488183-12493235 Arabidopsis thaliana
AT4G24040 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12491236-12493235 Arabidopsis thaliana
AT4G24040 5.0kb upstream 5.0kb upstream 8053 true Chr4: 12483183-12491235 Arabidopsis thaliana
AT4G24040 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12483183-12488182 Arabidopsis thaliana
AT4G24040 5.0kb downstream 5.0kb downstream 8053 true Chr4: 12488183-12496235 Arabidopsis thaliana
AT4G24040 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12491236-12496235 Arabidopsis thaliana
AT4G24040 10.0kb upstream 10.0kb upstream 13053 true Chr4: 12478183-12491235 Arabidopsis thaliana
AT4G24040 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12478183-12488182 Arabidopsis thaliana
AT4G24040 10.0kb downstream 10.0kb downstream 13053 true Chr4: 12488183-12501235 Arabidopsis thaliana
AT4G24040 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12491236-12501235 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361227 5261 Brassicaceae View MSA
123832210 5264 Brassicales-Malvales View MSA
124338013 5266 SBM View MSA
124239371 5268 Malvidae View MSA
124068038 5270 Rosid View MSA
123743670 5271 Pentapetalae View MSA
122788986 5272 Eudicot View MSA
122046703 5273 Angiosperm View MSA
121347864 5274 Embryophyte View MSA
123424777 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.132        
cufflinks 0.744        
cufflinks 1.836        
cufflinks 2.302        
cufflinks 3.379       High
cufflinks 0.394       Low

0 Strain