Gene : AT4G23950 A. thaliana TAIR10
Defline:  (1 of 3) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  2378
Name:  ? AT4G23950 Secondary Identifier:  ? PAC:19648489
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23950 0.5kb upstream 0.5kb upstream 3001 true Chr4: 12441547-12444547 Arabidopsis thaliana
AT4G23950 0.5kb upstream 0.5kb upstream 500 false Chr4: 12441547-12442046 Arabidopsis thaliana
AT4G23950 0.5kb downstream 0.5kb downstream 3001 true Chr4: 12442047-12445047 Arabidopsis thaliana
AT4G23950 0.5kb downstream 0.5kb downstream 500 false Chr4: 12444548-12445047 Arabidopsis thaliana
AT4G23950 1.0kb upstream 1.0kb upstream 3501 true Chr4: 12441047-12444547 Arabidopsis thaliana
AT4G23950 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12441047-12442046 Arabidopsis thaliana
AT4G23950 1.0kb downstream 1.0kb downstream 3501 true Chr4: 12442047-12445547 Arabidopsis thaliana
AT4G23950 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12444548-12445547 Arabidopsis thaliana
AT4G23950 2.0kb upstream 2.0kb upstream 4501 true Chr4: 12440047-12444547 Arabidopsis thaliana
AT4G23950 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12440047-12442046 Arabidopsis thaliana
AT4G23950 2.0kb downstream 2.0kb downstream 4501 true Chr4: 12442047-12446547 Arabidopsis thaliana
AT4G23950 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12444548-12446547 Arabidopsis thaliana
AT4G23950 5.0kb upstream 5.0kb upstream 7501 true Chr4: 12437047-12444547 Arabidopsis thaliana
AT4G23950 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12437047-12442046 Arabidopsis thaliana
AT4G23950 5.0kb downstream 5.0kb downstream 7501 true Chr4: 12442047-12449547 Arabidopsis thaliana
AT4G23950 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12444548-12449547 Arabidopsis thaliana
AT4G23950 10.0kb upstream 10.0kb upstream 12501 true Chr4: 12432047-12444547 Arabidopsis thaliana
AT4G23950 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12432047-12442046 Arabidopsis thaliana
AT4G23950 10.0kb downstream 10.0kb downstream 12501 true Chr4: 12442047-12454547 Arabidopsis thaliana
AT4G23950 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12444548-12454547 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366412 5261 Brassicaceae View MSA
123828986 5264 Brassicales-Malvales View MSA
124321568 5266 SBM View MSA
124241982 5268 Malvidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.542        
cufflinks 2.013        
cufflinks 0.992       Low
cufflinks 2.12       High
cufflinks 0.957       Low
cufflinks 1.754        

0 Strain