Gene : AT4G23860 A. thaliana TAIR10
Defline:  (1 of 1) K11979 - E3 ubiquitin-protein ligase UBR7 [EC:6.3.2.19] (UBR7) Genomic Order:  2366
Name:  ? AT4G23860 Secondary Identifier:  ? PAC:19643973
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23860 0.5kb upstream 0.5kb upstream 3064 true Chr4: 12408507-12411570 Arabidopsis thaliana
AT4G23860 0.5kb upstream 0.5kb upstream 500 false Chr4: 12408507-12409006 Arabidopsis thaliana
AT4G23860 0.5kb downstream 0.5kb downstream 3064 true Chr4: 12409007-12412070 Arabidopsis thaliana
AT4G23860 0.5kb downstream 0.5kb downstream 500 false Chr4: 12411571-12412070 Arabidopsis thaliana
AT4G23860 1.0kb upstream 1.0kb upstream 3564 true Chr4: 12408007-12411570 Arabidopsis thaliana
AT4G23860 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12408007-12409006 Arabidopsis thaliana
AT4G23860 1.0kb downstream 1.0kb downstream 3564 true Chr4: 12409007-12412570 Arabidopsis thaliana
AT4G23860 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12411571-12412570 Arabidopsis thaliana
AT4G23860 2.0kb upstream 2.0kb upstream 4564 true Chr4: 12407007-12411570 Arabidopsis thaliana
AT4G23860 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12407007-12409006 Arabidopsis thaliana
AT4G23860 2.0kb downstream 2.0kb downstream 4564 true Chr4: 12409007-12413570 Arabidopsis thaliana
AT4G23860 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12411571-12413570 Arabidopsis thaliana
AT4G23860 5.0kb upstream 5.0kb upstream 7564 true Chr4: 12404007-12411570 Arabidopsis thaliana
AT4G23860 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12404007-12409006 Arabidopsis thaliana
AT4G23860 5.0kb downstream 5.0kb downstream 7564 true Chr4: 12409007-12416570 Arabidopsis thaliana
AT4G23860 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12411571-12416570 Arabidopsis thaliana
AT4G23860 10.0kb upstream 10.0kb upstream 12564 true Chr4: 12399007-12411570 Arabidopsis thaliana
AT4G23860 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12399007-12409006 Arabidopsis thaliana
AT4G23860 10.0kb downstream 10.0kb downstream 12564 true Chr4: 12409007-12421570 Arabidopsis thaliana
AT4G23860 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12411571-12421570 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370669 5261 Brassicaceae View MSA
123832085 5264 Brassicales-Malvales View MSA
124346316 5266 SBM View MSA
124239514 5268 Malvidae View MSA
124062977 5270 Rosid View MSA
123737200 5271 Pentapetalae View MSA
122790604 5272 Eudicot View MSA
122043185 5273 Angiosperm View MSA
121344097 5274 Embryophyte View MSA
123379975 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79        
cufflinks 4.057        
cufflinks 3.665       Low
cufflinks 4.122       High
cufflinks 4.042        
cufflinks 3.741        

0 Strain