Gene : AT4G23882 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22814:SF14 - ATFP6-LIKE PROTEIN-RELATED Genomic Order:  2369
Name:  ? AT4G23882 Secondary Identifier:  ? PAC:19644188
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23882 0.5kb upstream 0.5kb upstream 1841 true Chr4: 12417053-12418893 Arabidopsis thaliana
AT4G23882 0.5kb upstream 0.5kb upstream 500 false Chr4: 12417053-12417552 Arabidopsis thaliana
AT4G23882 0.5kb downstream 0.5kb downstream 1841 true Chr4: 12417553-12419393 Arabidopsis thaliana
AT4G23882 0.5kb downstream 0.5kb downstream 500 false Chr4: 12418894-12419393 Arabidopsis thaliana
AT4G23882 1.0kb upstream 1.0kb upstream 2341 true Chr4: 12416553-12418893 Arabidopsis thaliana
AT4G23882 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12416553-12417552 Arabidopsis thaliana
AT4G23882 1.0kb downstream 1.0kb downstream 2341 true Chr4: 12417553-12419893 Arabidopsis thaliana
AT4G23882 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12418894-12419893 Arabidopsis thaliana
AT4G23882 2.0kb upstream 2.0kb upstream 3341 true Chr4: 12415553-12418893 Arabidopsis thaliana
AT4G23882 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12415553-12417552 Arabidopsis thaliana
AT4G23882 2.0kb downstream 2.0kb downstream 3341 true Chr4: 12417553-12420893 Arabidopsis thaliana
AT4G23882 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12418894-12420893 Arabidopsis thaliana
AT4G23882 5.0kb upstream 5.0kb upstream 6341 true Chr4: 12412553-12418893 Arabidopsis thaliana
AT4G23882 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12412553-12417552 Arabidopsis thaliana
AT4G23882 5.0kb downstream 5.0kb downstream 6341 true Chr4: 12417553-12423893 Arabidopsis thaliana
AT4G23882 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12418894-12423893 Arabidopsis thaliana
AT4G23882 10.0kb upstream 10.0kb upstream 11341 true Chr4: 12407553-12418893 Arabidopsis thaliana
AT4G23882 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12407553-12417552 Arabidopsis thaliana
AT4G23882 10.0kb downstream 10.0kb downstream 11341 true Chr4: 12417553-12428893 Arabidopsis thaliana
AT4G23882 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12418894-12428893 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330389 5261 Brassicaceae Singleton cluster - no MSA
123771637 5264 Brassicales-Malvales Singleton cluster - no MSA
124270165 5266 SBM Singleton cluster - no MSA
124249975 5268 Malvidae View MSA
124070484 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.011     Low Low
cufflinks 0.027     Low  
cufflinks 0.034     Low  
cufflinks 0.02     Low  
cufflinks 0.072     Low High

0 Strain