Sequence Feature Displayer
Ontology Annotation Displayer
21 Pathways
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT4G23900 0.5kb upstream | 0.5kb | upstream | 2578 | true | Chr4: 12423951-12426528 | Arabidopsis thaliana |
AT4G23900 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr4: 12423951-12424450 | Arabidopsis thaliana |
AT4G23900 0.5kb downstream | 0.5kb | downstream | 2578 | true | Chr4: 12424451-12427028 | Arabidopsis thaliana |
AT4G23900 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr4: 12426529-12427028 | Arabidopsis thaliana |
AT4G23900 1.0kb upstream | 1.0kb | upstream | 3078 | true | Chr4: 12423451-12426528 | Arabidopsis thaliana |
AT4G23900 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr4: 12423451-12424450 | Arabidopsis thaliana |
AT4G23900 1.0kb downstream | 1.0kb | downstream | 3078 | true | Chr4: 12424451-12427528 | Arabidopsis thaliana |
AT4G23900 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr4: 12426529-12427528 | Arabidopsis thaliana |
AT4G23900 2.0kb upstream | 2.0kb | upstream | 4078 | true | Chr4: 12422451-12426528 | Arabidopsis thaliana |
AT4G23900 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr4: 12422451-12424450 | Arabidopsis thaliana |
AT4G23900 2.0kb downstream | 2.0kb | downstream | 4078 | true | Chr4: 12424451-12428528 | Arabidopsis thaliana |
AT4G23900 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr4: 12426529-12428528 | Arabidopsis thaliana |
AT4G23900 5.0kb upstream | 5.0kb | upstream | 7078 | true | Chr4: 12419451-12426528 | Arabidopsis thaliana |
AT4G23900 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr4: 12419451-12424450 | Arabidopsis thaliana |
AT4G23900 5.0kb downstream | 5.0kb | downstream | 7078 | true | Chr4: 12424451-12431528 | Arabidopsis thaliana |
AT4G23900 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr4: 12426529-12431528 | Arabidopsis thaliana |
AT4G23900 10.0kb upstream | 10.0kb | upstream | 12078 | true | Chr4: 12414451-12426528 | Arabidopsis thaliana |
AT4G23900 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr4: 12414451-12424450 | Arabidopsis thaliana |
AT4G23900 10.0kb downstream | 10.0kb | downstream | 12078 | true | Chr4: 12424451-12436528 | Arabidopsis thaliana |
AT4G23900 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr4: 12426529-12436528 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122378835 | 5261 | Brassicaceae | View MSA |
123828866 | 5264 | Brassicales-Malvales | View MSA |
124337137 | 5266 | SBM | View MSA |
124238363 | 5268 | Malvidae | View MSA |
124068099 | 5270 | Rosid | View MSA |
123749251 | 5271 | Pentapetalae | View MSA |
122792257 | 5272 | Eudicot | View MSA |
122050213 | 5273 | Angiosperm | View MSA |
123428962 | 5275 | Viridiplantae | View MSA |
121346571 | 5274 | Embryophyte | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.007 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.03 | Low | High | ||
cufflinks | 0.013 | Low | |||
cufflinks | 0.022 | Low |