Gene : AT4G23730 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11122:SF10 - APOSPORY-ASSOCIATED PROTEIN C-RELATED Genomic Order:  2354
Name:  ? AT4G23730 Secondary Identifier:  ? PAC:19645722
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23730 0.5kb upstream 0.5kb upstream 3115 true Chr4: 12361984-12365098 Arabidopsis thaliana
AT4G23730 0.5kb upstream 0.5kb upstream 500 false Chr4: 12361984-12362483 Arabidopsis thaliana
AT4G23730 0.5kb downstream 0.5kb downstream 3115 true Chr4: 12362484-12365598 Arabidopsis thaliana
AT4G23730 0.5kb downstream 0.5kb downstream 500 false Chr4: 12365099-12365598 Arabidopsis thaliana
AT4G23730 1.0kb upstream 1.0kb upstream 3615 true Chr4: 12361484-12365098 Arabidopsis thaliana
AT4G23730 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12361484-12362483 Arabidopsis thaliana
AT4G23730 1.0kb downstream 1.0kb downstream 3615 true Chr4: 12362484-12366098 Arabidopsis thaliana
AT4G23730 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12365099-12366098 Arabidopsis thaliana
AT4G23730 2.0kb upstream 2.0kb upstream 4615 true Chr4: 12360484-12365098 Arabidopsis thaliana
AT4G23730 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12360484-12362483 Arabidopsis thaliana
AT4G23730 2.0kb downstream 2.0kb downstream 4615 true Chr4: 12362484-12367098 Arabidopsis thaliana
AT4G23730 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12365099-12367098 Arabidopsis thaliana
AT4G23730 5.0kb upstream 5.0kb upstream 7615 true Chr4: 12357484-12365098 Arabidopsis thaliana
AT4G23730 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12357484-12362483 Arabidopsis thaliana
AT4G23730 5.0kb downstream 5.0kb downstream 7615 true Chr4: 12362484-12370098 Arabidopsis thaliana
AT4G23730 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12365099-12370098 Arabidopsis thaliana
AT4G23730 10.0kb upstream 10.0kb upstream 12615 true Chr4: 12352484-12365098 Arabidopsis thaliana
AT4G23730 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12352484-12362483 Arabidopsis thaliana
AT4G23730 10.0kb downstream 10.0kb downstream 12615 true Chr4: 12362484-12375098 Arabidopsis thaliana
AT4G23730 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12365099-12375098 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779653 5273 Angiosperm View MSA
122379747 5261 Brassicaceae View MSA
123836381 5264 Brassicales-Malvales View MSA
124337254 5266 SBM View MSA
124243308 5268 Malvidae View MSA
124068691 5270 Rosid View MSA
123743686 5271 Pentapetalae View MSA
122770739 5272 Eudicot View MSA
121051304 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.881        
cufflinks 27.224        
cufflinks 12.329       Low
cufflinks 26.977        
cufflinks 13.863       Low
cufflinks 29.036        

0 Strain