Gene : AT4G23690 A. thaliana TAIR10
Defline:  (1 of 5) PTHR21495//PTHR21495:SF40 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 12-RELATED Genomic Order:  2350
Name:  ? AT4G23690 Secondary Identifier:  ? PAC:19648987
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23690 0.5kb upstream 0.5kb upstream 1377 true Chr4: 12338871-12340247 Arabidopsis thaliana
AT4G23690 0.5kb upstream 0.5kb upstream 500 false Chr4: 12339748-12340247 Arabidopsis thaliana
AT4G23690 0.5kb downstream 0.5kb downstream 1377 true Chr4: 12338371-12339747 Arabidopsis thaliana
AT4G23690 0.5kb downstream 0.5kb downstream 500 false Chr4: 12338371-12338870 Arabidopsis thaliana
AT4G23690 1.0kb upstream 1.0kb upstream 1877 true Chr4: 12338871-12340747 Arabidopsis thaliana
AT4G23690 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12339748-12340747 Arabidopsis thaliana
AT4G23690 1.0kb downstream 1.0kb downstream 1877 true Chr4: 12337871-12339747 Arabidopsis thaliana
AT4G23690 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12337871-12338870 Arabidopsis thaliana
AT4G23690 2.0kb upstream 2.0kb upstream 2877 true Chr4: 12338871-12341747 Arabidopsis thaliana
AT4G23690 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12339748-12341747 Arabidopsis thaliana
AT4G23690 2.0kb downstream 2.0kb downstream 2877 true Chr4: 12336871-12339747 Arabidopsis thaliana
AT4G23690 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12336871-12338870 Arabidopsis thaliana
AT4G23690 5.0kb upstream 5.0kb upstream 5877 true Chr4: 12338871-12344747 Arabidopsis thaliana
AT4G23690 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12339748-12344747 Arabidopsis thaliana
AT4G23690 5.0kb downstream 5.0kb downstream 5877 true Chr4: 12333871-12339747 Arabidopsis thaliana
AT4G23690 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12333871-12338870 Arabidopsis thaliana
AT4G23690 10.0kb upstream 10.0kb upstream 10877 true Chr4: 12338871-12349747 Arabidopsis thaliana
AT4G23690 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12339748-12349747 Arabidopsis thaliana
AT4G23690 10.0kb downstream 10.0kb downstream 10877 true Chr4: 12328871-12339747 Arabidopsis thaliana
AT4G23690 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12328871-12338870 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377977 5261 Brassicaceae View MSA
123839086 5264 Brassicales-Malvales View MSA
124348293 5266 SBM View MSA
124245400 5268 Malvidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.88        
cufflinks 40.603     High  
cufflinks 1.237       Low
cufflinks 48.532     High  
cufflinks 1.195       Low
cufflinks 65.963     High High

0 Strain