Gene : WRKY53 A. thaliana TAIR10
Primary Identifier:  ? AT4G23810 Defline:  (1 of 72) PF03106 - WRKY DNA -binding domain (WRKY)
Genomic Order:  2362 Name:  ? AT4G23810
Secondary Identifier:  ? PAC:19648384
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23810 0.5kb upstream 0.5kb upstream 2113 true Chr4: 12392370-12394482 Arabidopsis thaliana
AT4G23810 0.5kb upstream 0.5kb upstream 500 false Chr4: 12393983-12394482 Arabidopsis thaliana
AT4G23810 0.5kb downstream 0.5kb downstream 2113 true Chr4: 12391870-12393982 Arabidopsis thaliana
AT4G23810 0.5kb downstream 0.5kb downstream 500 false Chr4: 12391870-12392369 Arabidopsis thaliana
AT4G23810 1.0kb upstream 1.0kb upstream 2613 true Chr4: 12392370-12394982 Arabidopsis thaliana
AT4G23810 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12393983-12394982 Arabidopsis thaliana
AT4G23810 1.0kb downstream 1.0kb downstream 2613 true Chr4: 12391370-12393982 Arabidopsis thaliana
AT4G23810 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12391370-12392369 Arabidopsis thaliana
AT4G23810 2.0kb upstream 2.0kb upstream 3613 true Chr4: 12392370-12395982 Arabidopsis thaliana
AT4G23810 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12393983-12395982 Arabidopsis thaliana
AT4G23810 2.0kb downstream 2.0kb downstream 3613 true Chr4: 12390370-12393982 Arabidopsis thaliana
AT4G23810 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12390370-12392369 Arabidopsis thaliana
AT4G23810 5.0kb upstream 5.0kb upstream 6613 true Chr4: 12392370-12398982 Arabidopsis thaliana
AT4G23810 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12393983-12398982 Arabidopsis thaliana
AT4G23810 5.0kb downstream 5.0kb downstream 6613 true Chr4: 12387370-12393982 Arabidopsis thaliana
AT4G23810 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12387370-12392369 Arabidopsis thaliana
AT4G23810 10.0kb upstream 10.0kb upstream 11613 true Chr4: 12392370-12403982 Arabidopsis thaliana
AT4G23810 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12393983-12403982 Arabidopsis thaliana
AT4G23810 10.0kb downstream 10.0kb downstream 11613 true Chr4: 12382370-12393982 Arabidopsis thaliana
AT4G23810 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12382370-12392369 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374894 5261 Brassicaceae View MSA
123840808 5264 Brassicales-Malvales View MSA
124349002 5266 SBM View MSA
124251852 5268 Malvidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.79     High High
cufflinks 12.351        
cufflinks 13.735        
cufflinks 10.596        
cufflinks 8.547        
cufflinks 15.515        

0 Strain