Gene : AT4G23620 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33284//PTHR33284:SF1 - FAMILY NOT NAMED // RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  2343
Name:  ? AT4G23620 Secondary Identifier:  ? PAC:19648380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23620 0.5kb upstream 0.5kb upstream 2633 true Chr4: 12314583-12317215 Arabidopsis thaliana
AT4G23620 0.5kb upstream 0.5kb upstream 500 false Chr4: 12316716-12317215 Arabidopsis thaliana
AT4G23620 0.5kb downstream 0.5kb downstream 2633 true Chr4: 12314083-12316715 Arabidopsis thaliana
AT4G23620 0.5kb downstream 0.5kb downstream 500 false Chr4: 12314083-12314582 Arabidopsis thaliana
AT4G23620 1.0kb upstream 1.0kb upstream 3133 true Chr4: 12314583-12317715 Arabidopsis thaliana
AT4G23620 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12316716-12317715 Arabidopsis thaliana
AT4G23620 1.0kb downstream 1.0kb downstream 3133 true Chr4: 12313583-12316715 Arabidopsis thaliana
AT4G23620 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12313583-12314582 Arabidopsis thaliana
AT4G23620 2.0kb upstream 2.0kb upstream 4133 true Chr4: 12314583-12318715 Arabidopsis thaliana
AT4G23620 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12316716-12318715 Arabidopsis thaliana
AT4G23620 2.0kb downstream 2.0kb downstream 4133 true Chr4: 12312583-12316715 Arabidopsis thaliana
AT4G23620 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12312583-12314582 Arabidopsis thaliana
AT4G23620 5.0kb upstream 5.0kb upstream 7133 true Chr4: 12314583-12321715 Arabidopsis thaliana
AT4G23620 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12316716-12321715 Arabidopsis thaliana
AT4G23620 5.0kb downstream 5.0kb downstream 7133 true Chr4: 12309583-12316715 Arabidopsis thaliana
AT4G23620 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12309583-12314582 Arabidopsis thaliana
AT4G23620 10.0kb upstream 10.0kb upstream 12133 true Chr4: 12314583-12326715 Arabidopsis thaliana
AT4G23620 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12316716-12326715 Arabidopsis thaliana
AT4G23620 10.0kb downstream 10.0kb downstream 12133 true Chr4: 12304583-12316715 Arabidopsis thaliana
AT4G23620 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12304583-12314582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368354 5261 Brassicaceae View MSA
123832401 5264 Brassicales-Malvales View MSA
124341331 5266 SBM View MSA
124240980 5268 Malvidae View MSA
124062283 5270 Rosid View MSA
123743591 5271 Pentapetalae View MSA
122793831 5272 Eudicot View MSA
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.296        
cufflinks 4.748        
cufflinks 2.64        
cufflinks 4.81        
cufflinks 2.396       Low
cufflinks 5.253       High

0 Strain