Gene : PPT1 A. thaliana TAIR10
Primary Identifier:  ? AT4G23660 Defline:  (1 of 1) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase
Genomic Order:  2347 Name:  ? AT4G23660
Secondary Identifier:  ? PAC:19643970
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5871 Arabidopsis thaliana pathologic  
Athaliana PWY-5872 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23660 0.5kb upstream 0.5kb upstream 4486 true Chr4: 12327694-12332179 Arabidopsis thaliana
AT4G23660 0.5kb upstream 0.5kb upstream 500 false Chr4: 12331680-12332179 Arabidopsis thaliana
AT4G23660 0.5kb downstream 0.5kb downstream 4486 true Chr4: 12327194-12331679 Arabidopsis thaliana
AT4G23660 0.5kb downstream 0.5kb downstream 500 false Chr4: 12327194-12327693 Arabidopsis thaliana
AT4G23660 1.0kb upstream 1.0kb upstream 4986 true Chr4: 12327694-12332679 Arabidopsis thaliana
AT4G23660 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12331680-12332679 Arabidopsis thaliana
AT4G23660 1.0kb downstream 1.0kb downstream 4986 true Chr4: 12326694-12331679 Arabidopsis thaliana
AT4G23660 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12326694-12327693 Arabidopsis thaliana
AT4G23660 2.0kb upstream 2.0kb upstream 5986 true Chr4: 12327694-12333679 Arabidopsis thaliana
AT4G23660 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12331680-12333679 Arabidopsis thaliana
AT4G23660 2.0kb downstream 2.0kb downstream 5986 true Chr4: 12325694-12331679 Arabidopsis thaliana
AT4G23660 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12325694-12327693 Arabidopsis thaliana
AT4G23660 5.0kb upstream 5.0kb upstream 8986 true Chr4: 12327694-12336679 Arabidopsis thaliana
AT4G23660 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12331680-12336679 Arabidopsis thaliana
AT4G23660 5.0kb downstream 5.0kb downstream 8986 true Chr4: 12322694-12331679 Arabidopsis thaliana
AT4G23660 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12322694-12327693 Arabidopsis thaliana
AT4G23660 10.0kb upstream 10.0kb upstream 13986 true Chr4: 12327694-12341679 Arabidopsis thaliana
AT4G23660 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12331680-12341679 Arabidopsis thaliana
AT4G23660 10.0kb downstream 10.0kb downstream 13986 true Chr4: 12317694-12331679 Arabidopsis thaliana
AT4G23660 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12317694-12327693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374084 5261 Brassicaceae View MSA
123828873 5264 Brassicales-Malvales View MSA
124338665 5266 SBM View MSA
124252362 5268 Malvidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.923        
cufflinks 1.354       High
cufflinks 0.991        
cufflinks 1.331       High
cufflinks 0.998        
cufflinks 1.002        

0 Strain