Gene : CPSUFE A. thaliana TAIR10
Primary Identifier:  ? AT4G26500 Defline:  (1 of 1) PTHR12735//PTHR12735:SF22 - BOLA-LIKE PROTEIN-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  2657 Name:  ? AT4G26500
Secondary Identifier:  ? PAC:19646256
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26500 0.5kb upstream 0.5kb upstream 1944 true Chr4: 13382198-13384141 Arabidopsis thaliana
AT4G26500 0.5kb upstream 0.5kb upstream 500 false Chr4: 13383642-13384141 Arabidopsis thaliana
AT4G26500 0.5kb downstream 0.5kb downstream 1944 true Chr4: 13381698-13383641 Arabidopsis thaliana
AT4G26500 0.5kb downstream 0.5kb downstream 500 false Chr4: 13381698-13382197 Arabidopsis thaliana
AT4G26500 1.0kb upstream 1.0kb upstream 2444 true Chr4: 13382198-13384641 Arabidopsis thaliana
AT4G26500 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13383642-13384641 Arabidopsis thaliana
AT4G26500 1.0kb downstream 1.0kb downstream 2444 true Chr4: 13381198-13383641 Arabidopsis thaliana
AT4G26500 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13381198-13382197 Arabidopsis thaliana
AT4G26500 2.0kb upstream 2.0kb upstream 3444 true Chr4: 13382198-13385641 Arabidopsis thaliana
AT4G26500 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13383642-13385641 Arabidopsis thaliana
AT4G26500 2.0kb downstream 2.0kb downstream 3444 true Chr4: 13380198-13383641 Arabidopsis thaliana
AT4G26500 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13380198-13382197 Arabidopsis thaliana
AT4G26500 5.0kb upstream 5.0kb upstream 6444 true Chr4: 13382198-13388641 Arabidopsis thaliana
AT4G26500 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13383642-13388641 Arabidopsis thaliana
AT4G26500 5.0kb downstream 5.0kb downstream 6444 true Chr4: 13377198-13383641 Arabidopsis thaliana
AT4G26500 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13377198-13382197 Arabidopsis thaliana
AT4G26500 10.0kb upstream 10.0kb upstream 11444 true Chr4: 13382198-13393641 Arabidopsis thaliana
AT4G26500 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13383642-13393641 Arabidopsis thaliana
AT4G26500 10.0kb downstream 10.0kb downstream 11444 true Chr4: 13372198-13383641 Arabidopsis thaliana
AT4G26500 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13372198-13382197 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374477 5261 Brassicaceae View MSA
123831317 5264 Brassicales-Malvales View MSA
124346006 5266 SBM View MSA
124238589 5268 Malvidae View MSA
124066981 5270 Rosid View MSA
123737933 5271 Pentapetalae View MSA
122787178 5272 Eudicot View MSA
122047873 5273 Angiosperm View MSA
121346278 5274 Embryophyte View MSA
123428426 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.74        
cufflinks 9.146        
cufflinks 32.948     High High
cufflinks 8.419        
cufflinks 27.728     High  
cufflinks 8.567        

0 Strain