Gene : emb1027 A. thaliana TAIR10
Primary Identifier:  ? AT4G26300 Defline:  (1 of 2) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase
Genomic Order:  2634 Name:  ? AT4G26300
Secondary Identifier:  ? PAC:19646553
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRNA-CHARGING-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26300 0.5kb upstream 0.5kb upstream 5633 true Chr4: 13307977-13313609 Arabidopsis thaliana
AT4G26300 0.5kb upstream 0.5kb upstream 500 false Chr4: 13313110-13313609 Arabidopsis thaliana
AT4G26300 0.5kb downstream 0.5kb downstream 5633 true Chr4: 13307477-13313109 Arabidopsis thaliana
AT4G26300 0.5kb downstream 0.5kb downstream 500 false Chr4: 13307477-13307976 Arabidopsis thaliana
AT4G26300 1.0kb upstream 1.0kb upstream 6133 true Chr4: 13307977-13314109 Arabidopsis thaliana
AT4G26300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13313110-13314109 Arabidopsis thaliana
AT4G26300 1.0kb downstream 1.0kb downstream 6133 true Chr4: 13306977-13313109 Arabidopsis thaliana
AT4G26300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13306977-13307976 Arabidopsis thaliana
AT4G26300 2.0kb upstream 2.0kb upstream 7133 true Chr4: 13307977-13315109 Arabidopsis thaliana
AT4G26300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13313110-13315109 Arabidopsis thaliana
AT4G26300 2.0kb downstream 2.0kb downstream 7133 true Chr4: 13305977-13313109 Arabidopsis thaliana
AT4G26300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13305977-13307976 Arabidopsis thaliana
AT4G26300 5.0kb upstream 5.0kb upstream 10133 true Chr4: 13307977-13318109 Arabidopsis thaliana
AT4G26300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13313110-13318109 Arabidopsis thaliana
AT4G26300 5.0kb downstream 5.0kb downstream 10133 true Chr4: 13302977-13313109 Arabidopsis thaliana
AT4G26300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13302977-13307976 Arabidopsis thaliana
AT4G26300 10.0kb upstream 10.0kb upstream 15133 true Chr4: 13307977-13323109 Arabidopsis thaliana
AT4G26300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13313110-13323109 Arabidopsis thaliana
AT4G26300 10.0kb downstream 10.0kb downstream 15133 true Chr4: 13297977-13313109 Arabidopsis thaliana
AT4G26300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13297977-13307976 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381542 5261 Brassicaceae View MSA
123837210 5264 Brassicales-Malvales View MSA
124337700 5266 SBM View MSA
124238574 5268 Malvidae View MSA
124068746 5270 Rosid View MSA
123739648 5271 Pentapetalae View MSA
122789806 5272 Eudicot View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.135        
cufflinks 13.704        
cufflinks 12.929        
cufflinks 15.03        
cufflinks 12.045       Low
cufflinks 17.611       High

0 Strain