Gene : AT4G26400 A. thaliana TAIR10
Defline:  (1 of 4) PTHR22763//PTHR22763:SF59 - RING ZINC FINGER PROTEIN // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  2643
Name:  ? AT4G26400 Secondary Identifier:  ? PAC:19644709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26400 0.5kb upstream 0.5kb upstream 2290 true Chr4: 13344808-13347097 Arabidopsis thaliana
AT4G26400 0.5kb upstream 0.5kb upstream 500 false Chr4: 13346598-13347097 Arabidopsis thaliana
AT4G26400 0.5kb downstream 0.5kb downstream 2290 true Chr4: 13344308-13346597 Arabidopsis thaliana
AT4G26400 0.5kb downstream 0.5kb downstream 500 false Chr4: 13344308-13344807 Arabidopsis thaliana
AT4G26400 1.0kb upstream 1.0kb upstream 2790 true Chr4: 13344808-13347597 Arabidopsis thaliana
AT4G26400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13346598-13347597 Arabidopsis thaliana
AT4G26400 1.0kb downstream 1.0kb downstream 2790 true Chr4: 13343808-13346597 Arabidopsis thaliana
AT4G26400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13343808-13344807 Arabidopsis thaliana
AT4G26400 2.0kb upstream 2.0kb upstream 3790 true Chr4: 13344808-13348597 Arabidopsis thaliana
AT4G26400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13346598-13348597 Arabidopsis thaliana
AT4G26400 2.0kb downstream 2.0kb downstream 3790 true Chr4: 13342808-13346597 Arabidopsis thaliana
AT4G26400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13342808-13344807 Arabidopsis thaliana
AT4G26400 5.0kb upstream 5.0kb upstream 6790 true Chr4: 13344808-13351597 Arabidopsis thaliana
AT4G26400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13346598-13351597 Arabidopsis thaliana
AT4G26400 5.0kb downstream 5.0kb downstream 6790 true Chr4: 13339808-13346597 Arabidopsis thaliana
AT4G26400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13339808-13344807 Arabidopsis thaliana
AT4G26400 10.0kb upstream 10.0kb upstream 11790 true Chr4: 13344808-13356597 Arabidopsis thaliana
AT4G26400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13346598-13356597 Arabidopsis thaliana
AT4G26400 10.0kb downstream 10.0kb downstream 11790 true Chr4: 13334808-13346597 Arabidopsis thaliana
AT4G26400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13334808-13344807 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028051 5273 Angiosperm View MSA
122368809 5261 Brassicaceae View MSA
123799659 5264 Brassicales-Malvales View MSA
124297155 5266 SBM View MSA
124149115 5268 Malvidae View MSA
123874986 5270 Rosid View MSA
123458877 5271 Pentapetalae View MSA
122494274 5272 Eudicot View MSA
121297598 5274 Embryophyte View MSA
123335638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.882        
cufflinks 23.481       High
cufflinks 13.019       Low
cufflinks 20.272        
cufflinks 13.899        
cufflinks 18.976        

0 Strain