Gene : CGA1 A. thaliana TAIR10
Primary Identifier:  ? AT4G26150 Defline:  (1 of 2) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // SUBFAMILY NOT NAMED
Genomic Order:  2618 Name:  ? AT4G26150
Secondary Identifier:  ? PAC:19648519
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26150 0.5kb upstream 0.5kb upstream 2195 true Chr4: 13252710-13254904 Arabidopsis thaliana
AT4G26150 0.5kb upstream 0.5kb upstream 500 false Chr4: 13252710-13253209 Arabidopsis thaliana
AT4G26150 0.5kb downstream 0.5kb downstream 2195 true Chr4: 13253210-13255404 Arabidopsis thaliana
AT4G26150 0.5kb downstream 0.5kb downstream 500 false Chr4: 13254905-13255404 Arabidopsis thaliana
AT4G26150 1.0kb upstream 1.0kb upstream 2695 true Chr4: 13252210-13254904 Arabidopsis thaliana
AT4G26150 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13252210-13253209 Arabidopsis thaliana
AT4G26150 1.0kb downstream 1.0kb downstream 2695 true Chr4: 13253210-13255904 Arabidopsis thaliana
AT4G26150 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13254905-13255904 Arabidopsis thaliana
AT4G26150 2.0kb upstream 2.0kb upstream 3695 true Chr4: 13251210-13254904 Arabidopsis thaliana
AT4G26150 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13251210-13253209 Arabidopsis thaliana
AT4G26150 2.0kb downstream 2.0kb downstream 3695 true Chr4: 13253210-13256904 Arabidopsis thaliana
AT4G26150 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13254905-13256904 Arabidopsis thaliana
AT4G26150 5.0kb upstream 5.0kb upstream 6695 true Chr4: 13248210-13254904 Arabidopsis thaliana
AT4G26150 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13248210-13253209 Arabidopsis thaliana
AT4G26150 5.0kb downstream 5.0kb downstream 6695 true Chr4: 13253210-13259904 Arabidopsis thaliana
AT4G26150 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13254905-13259904 Arabidopsis thaliana
AT4G26150 10.0kb upstream 10.0kb upstream 11695 true Chr4: 13243210-13254904 Arabidopsis thaliana
AT4G26150 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13243210-13253209 Arabidopsis thaliana
AT4G26150 10.0kb downstream 10.0kb downstream 11695 true Chr4: 13253210-13264904 Arabidopsis thaliana
AT4G26150 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13254905-13264904 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373575 5261 Brassicaceae View MSA
123840766 5264 Brassicales-Malvales View MSA
124351618 5266 SBM View MSA
124250458 5268 Malvidae View MSA
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.051        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.019       Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain