Gene : AT4G25960 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24221:SF138 - LP14331P-RELATED Genomic Order:  2597
Name:  ? AT4G25960 Secondary Identifier:  ? PAC:19648420
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25960 0.5kb upstream 0.5kb upstream 6723 true Chr4: 13176909-13183631 Arabidopsis thaliana
AT4G25960 0.5kb upstream 0.5kb upstream 500 false Chr4: 13176909-13177408 Arabidopsis thaliana
AT4G25960 0.5kb downstream 0.5kb downstream 6723 true Chr4: 13177409-13184131 Arabidopsis thaliana
AT4G25960 0.5kb downstream 0.5kb downstream 500 false Chr4: 13183632-13184131 Arabidopsis thaliana
AT4G25960 1.0kb upstream 1.0kb upstream 7223 true Chr4: 13176409-13183631 Arabidopsis thaliana
AT4G25960 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13176409-13177408 Arabidopsis thaliana
AT4G25960 1.0kb downstream 1.0kb downstream 7223 true Chr4: 13177409-13184631 Arabidopsis thaliana
AT4G25960 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13183632-13184631 Arabidopsis thaliana
AT4G25960 2.0kb upstream 2.0kb upstream 8223 true Chr4: 13175409-13183631 Arabidopsis thaliana
AT4G25960 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13175409-13177408 Arabidopsis thaliana
AT4G25960 2.0kb downstream 2.0kb downstream 8223 true Chr4: 13177409-13185631 Arabidopsis thaliana
AT4G25960 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13183632-13185631 Arabidopsis thaliana
AT4G25960 5.0kb upstream 5.0kb upstream 11223 true Chr4: 13172409-13183631 Arabidopsis thaliana
AT4G25960 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13172409-13177408 Arabidopsis thaliana
AT4G25960 5.0kb downstream 5.0kb downstream 11223 true Chr4: 13177409-13188631 Arabidopsis thaliana
AT4G25960 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13183632-13188631 Arabidopsis thaliana
AT4G25960 10.0kb upstream 10.0kb upstream 16223 true Chr4: 13167409-13183631 Arabidopsis thaliana
AT4G25960 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13167409-13177408 Arabidopsis thaliana
AT4G25960 10.0kb downstream 10.0kb downstream 16223 true Chr4: 13177409-13193631 Arabidopsis thaliana
AT4G25960 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13183632-13193631 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360521 5261 Brassicaceae View MSA
123834433 5264 Brassicales-Malvales View MSA
124339926 5266 SBM View MSA
124247808 5268 Malvidae View MSA
124067084 5270 Rosid View MSA
123740508 5271 Pentapetalae View MSA
122789191 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.819        
cufflinks 0.333     Low Low
cufflinks 8.157        
cufflinks 0.856        
cufflinks 8.387        
cufflinks 0.297     Low Low

0 Strain