Gene : AT4G25750 A. thaliana TAIR10

Defline:  (1 of 2) PTHR19241:SF290 - ABC TRANSPORTER G FAMILY MEMBER 4-RELATED Genomic Order:  2574
Name:  ? AT4G25750 Secondary Identifier:  ? PAC:19645991

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25750 0.5kb upstream 0.5kb upstream 2234 true Chr4: 13110627-13112860 Arabidopsis thaliana
AT4G25750 0.5kb upstream 0.5kb upstream 500 false Chr4: 13112361-13112860 Arabidopsis thaliana
AT4G25750 0.5kb downstream 0.5kb downstream 2234 true Chr4: 13110127-13112360 Arabidopsis thaliana
AT4G25750 0.5kb downstream 0.5kb downstream 500 false Chr4: 13110127-13110626 Arabidopsis thaliana
AT4G25750 1.0kb upstream 1.0kb upstream 2734 true Chr4: 13110627-13113360 Arabidopsis thaliana
AT4G25750 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13112361-13113360 Arabidopsis thaliana
AT4G25750 1.0kb downstream 1.0kb downstream 2734 true Chr4: 13109627-13112360 Arabidopsis thaliana
AT4G25750 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13109627-13110626 Arabidopsis thaliana
AT4G25750 2.0kb upstream 2.0kb upstream 3734 true Chr4: 13110627-13114360 Arabidopsis thaliana
AT4G25750 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13112361-13114360 Arabidopsis thaliana
AT4G25750 2.0kb downstream 2.0kb downstream 3734 true Chr4: 13108627-13112360 Arabidopsis thaliana
AT4G25750 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13108627-13110626 Arabidopsis thaliana
AT4G25750 5.0kb upstream 5.0kb upstream 6734 true Chr4: 13110627-13117360 Arabidopsis thaliana
AT4G25750 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13112361-13117360 Arabidopsis thaliana
AT4G25750 5.0kb downstream 5.0kb downstream 6734 true Chr4: 13105627-13112360 Arabidopsis thaliana
AT4G25750 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13105627-13110626 Arabidopsis thaliana
AT4G25750 10.0kb upstream 10.0kb upstream 11734 true Chr4: 13110627-13122360 Arabidopsis thaliana
AT4G25750 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13112361-13122360 Arabidopsis thaliana
AT4G25750 10.0kb downstream 10.0kb downstream 11734 true Chr4: 13100627-13112360 Arabidopsis thaliana
AT4G25750 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13100627-13110626 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373334 5261 Brassicaceae View MSA
123835060 5264 Brassicales-Malvales View MSA
124346254 5266 SBM View MSA
124240915 5268 Malvidae View MSA
124066489 5270 Rosid View MSA
123753751 5271 Pentapetalae View MSA
122795312 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248     Low  
cufflinks 0.421        
cufflinks 0.129     Low Low
cufflinks 0.798       High
cufflinks 0.181     Low  
cufflinks 0.483        

0 Strain