Gene : AT4G25780 A. thaliana TAIR10
Defline:  (1 of 7) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  2577
Name:  ? AT4G25780 Secondary Identifier:  ? PAC:19645352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25780 0.5kb upstream 0.5kb upstream 1388 true Chr4: 13120568-13121955 Arabidopsis thaliana
AT4G25780 0.5kb upstream 0.5kb upstream 500 false Chr4: 13120568-13121067 Arabidopsis thaliana
AT4G25780 0.5kb downstream 0.5kb downstream 1388 true Chr4: 13121068-13122455 Arabidopsis thaliana
AT4G25780 0.5kb downstream 0.5kb downstream 500 false Chr4: 13121956-13122455 Arabidopsis thaliana
AT4G25780 1.0kb upstream 1.0kb upstream 1888 true Chr4: 13120068-13121955 Arabidopsis thaliana
AT4G25780 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13120068-13121067 Arabidopsis thaliana
AT4G25780 1.0kb downstream 1.0kb downstream 1888 true Chr4: 13121068-13122955 Arabidopsis thaliana
AT4G25780 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13121956-13122955 Arabidopsis thaliana
AT4G25780 2.0kb upstream 2.0kb upstream 2888 true Chr4: 13119068-13121955 Arabidopsis thaliana
AT4G25780 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13119068-13121067 Arabidopsis thaliana
AT4G25780 2.0kb downstream 2.0kb downstream 2888 true Chr4: 13121068-13123955 Arabidopsis thaliana
AT4G25780 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13121956-13123955 Arabidopsis thaliana
AT4G25780 5.0kb upstream 5.0kb upstream 5888 true Chr4: 13116068-13121955 Arabidopsis thaliana
AT4G25780 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13116068-13121067 Arabidopsis thaliana
AT4G25780 5.0kb downstream 5.0kb downstream 5888 true Chr4: 13121068-13126955 Arabidopsis thaliana
AT4G25780 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13121956-13126955 Arabidopsis thaliana
AT4G25780 10.0kb upstream 10.0kb upstream 10888 true Chr4: 13111068-13121955 Arabidopsis thaliana
AT4G25780 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13111068-13121067 Arabidopsis thaliana
AT4G25780 10.0kb downstream 10.0kb downstream 10888 true Chr4: 13121068-13131955 Arabidopsis thaliana
AT4G25780 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13121956-13131955 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363465 5261 Brassicaceae View MSA
123830867 5264 Brassicales-Malvales View MSA
124341470 5266 SBM View MSA
124238884 5268 Malvidae View MSA
124069023 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.999        
cufflinks 3.364        
cufflinks 1.18        
cufflinks 3.266        
cufflinks 0.741       Low
cufflinks 3.673        

0 Strain